Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022295.1-P | Field mustard | golgi | 84.09 | 84.92 |
| CDX92215 | Canola | golgi | 84.09 | 84.92 |
| CDY24441 | Canola | golgi | 84.09 | 84.92 |
| PGSC0003DMT400080717 | Potato | plasma membrane | 58.44 | 64.75 |
| AT1G15080.1 | Thale cress | plasma membrane | 58.12 | 61.72 |
| KRG98223 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 57.47 | 60.82 |
| Solyc04g025370.1.1 | Tomato | endoplasmic reticulum | 31.17 | 60.76 |
| Solyc04g025400.2.1 | Tomato | mitochondrion, plasma membrane | 58.77 | 57.1 |
| PGSC0003DMT400025204 | Potato | extracellular | 13.96 | 56.58 |
| VIT_17s0000g03170.t01 | Wine grape | plasma membrane | 56.82 | 54.69 |
| AT2G01180.3 | Thale cress | plasma membrane | 54.87 | 51.21 |
| KRH30180 | Soybean | endoplasmic reticulum | 46.43 | 49.65 |
| AT3G02600.1 | Thale cress | plasma membrane | 51.95 | 43.96 |
| GSMUA_Achr6P01360_001 | Banana | mitochondrion | 34.42 | 29.61 |
Protein Annotations
| Gene3D:1.20.144.10 | MapMan:5.2.2.1 | EntrezGene:821350 | ProteinID:AEE76067.1 | EMBL:AK229475 | ArrayExpress:AT3G18220 |
| EnsemblPlantsGene:AT3G18220 | RefSeq:AT3G18220 | TAIR:AT3G18220 | RefSeq:AT3G18220-TAIR-G | EnsemblPlants:AT3G18220.1 | TAIR:AT3G18220.1 |
| EMBL:AY087632 | Unigene:At.38588 | ProteinID:BAB01172.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008195 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016311 | GO:GO:0016787 | RefSeq:NP_566602.1 | PFAM:PF01569 | PO:PO:0000084 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10165 | PANTHER:PTHR10165:SF91 | InterPro:P_Acid_Pase_2/haloperoxi_sf |
| InterPro:P_Acid_Pase_2/haloperoxidase | UniProt:Q0WNG6 | SMART:SM00014 | SUPFAM:SSF48317 | TMHMM:TMhelix | UniParc:UPI0000163441 |
| SEG:seg | : | : | : | : | : |
Description
LPP4Probable lipid phosphate phosphatase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNG6]
Coordinates
chr3:+:6247900..6250007
Molecular Weight (calculated)
35103.6 Da
IEP (calculated)
8.287
GRAVY (calculated)
0.108
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIMLGSHS VKSHGWKVAR EHLCDWLILV VLGLIDIVLN VIEPFHRYIG PDMLTDLTFP FYEDTIPMWA VPIICILVPI CIFIVYYYYR RDVYDLHHAI
101: LGIGFSCLVT GVTTDSIKDA VGRPRPNFFY RCFPNGKPKF HPDTKDVVCH GVKKIIKEGY KSFPSGHTSW SFAGLTFLAW YLSGKIKVFD RRGHVAKLCL
201: VFLPILISIL IGISRVDDYW HHWTDVFAGA IIGIFVASFS YLHFFPYPYD ENGWAPHAYF RMLAERSTGR ATTMTRTGSR GMLGNDVEPG NSASSPHDRH
301: RESTDSDF
101: LGIGFSCLVT GVTTDSIKDA VGRPRPNFFY RCFPNGKPKF HPDTKDVVCH GVKKIIKEGY KSFPSGHTSW SFAGLTFLAW YLSGKIKVFD RRGHVAKLCL
201: VFLPILISIL IGISRVDDYW HHWTDVFAGA IIGIFVASFS YLHFFPYPYD ENGWAPHAYF RMLAERSTGR ATTMTRTGSR GMLGNDVEPG NSASSPHDRH
301: RESTDSDF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.