Factsheet for Bra022295.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92215	Canola	golgi	100.0	100.0
CDY24441	Canola	golgi	99.34	99.34
AT3G18220.1	Thale cress	plasma membrane	84.92	84.09
PGSC0003DMT400080717	Potato	plasma membrane	55.41	60.79
Solyc04g025370.1.1	Tomato	endoplasmic reticulum	30.49	58.86
KRG98223	Soybean	endoplasmic reticulum, extracellular, plasma membrane	56.07	58.76
Bra026782.1-P	Field mustard	plasma membrane	58.03	56.73
Bra024900.1-P	Field mustard	plasma membrane	54.1	56.7
PGSC0003DMT400025204	Potato	extracellular	14.1	56.58
Bra017464.1-P	Field mustard	plasma membrane	52.79	54.03
Solyc04g025400.2.1	Tomato	mitochondrion, plasma membrane	55.41	53.31
VIT_17s0000g03170.t01	Wine grape	plasma membrane	55.08	52.5
Bra001056.1-P	Field mustard	plasma membrane	51.8	52.49
KRH30180	Soybean	endoplasmic reticulum	45.57	48.26
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	55.74	48.02
GSMUA_Achr6P01360_001	Banana	mitochondrion	33.77	28.77

Protein Annotations

EnsemblPlants:Bra022295.1	EnsemblPlants:Bra022295.1-P	EnsemblPlantsGene:Bra022295	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165	PANTHER:PTHR10165:SF91	PFAM:PF01569
SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0002547363	UniProt:M4E0J8
MapMan:5.2.2.1	:	:	:	:	:

Description

AT3G18220 (E=6e-132) | phosphatidic acid phosphatase family protein / PAP2 family protein

Coordinates

chrA05:-:18561015..18562653

Molecular Weight (calculated)

34720.3 Da

IEP (calculated)

8.370

GRAVY (calculated)

0.171

Length

305 amino acids

Sequence
(BLAST)

001: MGKITLGSHT VKSHGWKVAR EHLIDWIILV LLGIVIIVLN IMEPFHRYIG PDMLTDLTFP LYQDTIPIWA VPIICILVPI CIFTVYYYFG RDVYDLHHAI
101: LGIGFSCLVT GVTTDSIKNA VGRPRPNFFH RCFPDGKAKF DSVTKDVVCH GLKKIIKEGY KSFPSGHTSW SFAGLTFLAW YLSGKIKVFD RRGHVAKLCL
201: VFLPILVAVL IGITRVDDYW HHWTDVFAGA IIGIFFASLS YLHFFPYPYD DNGWAPHAYF RMLAESSRRD TTMTRSSSRE MLENDVELGS TSMPHHRNRG
301: STDSE

Best Arabidopsis Sequence Match ( AT3G18220.1 )
(BLAST)

001: MAKIMLGSHS VKSHGWKVAR EHLCDWLILV VLGLIDIVLN VIEPFHRYIG PDMLTDLTFP FYEDTIPMWA VPIICILVPI CIFIVYYYYR RDVYDLHHAI
101: LGIGFSCLVT GVTTDSIKDA VGRPRPNFFY RCFPNGKPKF HPDTKDVVCH GVKKIIKEGY KSFPSGHTSW SFAGLTFLAW YLSGKIKVFD RRGHVAKLCL
201: VFLPILISIL IGISRVDDYW HHWTDVFAGA IIGIFVASFS YLHFFPYPYD ENGWAPHAYF RMLAERSTGR ATTMTRTGSR GMLGNDVEPG NSASSPHDRH
301: RESTDSDF

Arabidopsis Description

LPP4Probable lipid phosphate phosphatase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNG6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.