Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 5
- golgi 4
- extracellular 4
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025204 | Potato | extracellular | 23.42 | 48.68 |
| Solyc04g025400.2.1 | Tomato | mitochondrion, plasma membrane | 84.81 | 42.27 |
| KRG98223 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 59.49 | 32.3 |
| AT3G18220.1 | Thale cress | plasma membrane | 60.76 | 31.17 |
| KRH30180 | Soybean | endoplasmic reticulum | 55.7 | 30.56 |
| Bra022295.1-P | Field mustard | golgi | 58.86 | 30.49 |
| CDX92215 | Canola | golgi | 58.86 | 30.49 |
| CDY24441 | Canola | golgi | 58.23 | 30.16 |
| Solyc05g008800.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 56.96 | 29.9 |
| VIT_17s0000g03170.t01 | Wine grape | plasma membrane | 60.13 | 29.69 |
| Solyc05g008810.2.1 | Tomato | nucleus | 59.49 | 29.19 |
| Solyc05g008820.2.1 | Tomato | plasma membrane | 55.06 | 27.02 |
| Solyc02g086370.2.1 | Tomato | mitochondrion, plasma membrane | 63.29 | 25.84 |
| GSMUA_Achr6P01360_001 | Banana | mitochondrion | 36.71 | 16.2 |
Protein Annotations
| Gene3D:1.20.144.10 | MapMan:5.2.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008195 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016311 |
| GO:GO:0016787 | UniProt:K4BQY2 | PFAM:PF01569 | PANTHER:PTHR10165 | PANTHER:PTHR10165:SF91 | InterPro:P_Acid_Pase_2/haloperoxi_sf |
| InterPro:P_Acid_Pase_2/haloperoxidase | SMART:SM00014 | SUPFAM:SSF48317 | EnsemblPlantsGene:Solyc04g025370.1 | EnsemblPlants:Solyc04g025370.1.1 | TMHMM:TMhelix |
| UniParc:UPI0002765A29 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:24036042..24037531
Molecular Weight (calculated)
18181.3 Da
IEP (calculated)
7.988
GRAVY (calculated)
0.603
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVHIFTVIL QWIVFLIYYH YRRDVYDLHH AILGILYSVL VIAVITDIIK YAVGRLRPKI FYRCFPDRFE AFQPNGDVNC HGDPKVVKEG YKSFTSGRTS
101: WSFAAELCIV LLALLFAALV GISRIDDYWH HWTDLFTGSI IGSVVASLCY LLFFPLPS
101: WSFAAELCIV LLALLFAALV GISRIDDYWH HWTDLFTGSI IGSVVASLCY LLFFPLPS
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.