Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400080717 | Potato | plasma membrane | 94.74 | 25.9 |
| Solyc04g025370.1.1 | Tomato | endoplasmic reticulum | 48.68 | 23.42 |
| KRG98223 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 59.21 | 15.46 |
| KRH30180 | Soybean | endoplasmic reticulum | 55.26 | 14.58 |
| Bra022295.1-P | Field mustard | golgi | 56.58 | 14.1 |
| CDX92215 | Canola | golgi | 56.58 | 14.1 |
| CDY24441 | Canola | golgi | 56.58 | 14.1 |
| AT3G18220.1 | Thale cress | plasma membrane | 56.58 | 13.96 |
| VIT_17s0000g03170.t01 | Wine grape | plasma membrane | 57.89 | 13.75 |
| PGSC0003DMT400078535 | Potato | plasma membrane | 57.89 | 13.66 |
| PGSC0003DMT400078418 | Potato | plasma membrane | 56.58 | 13.35 |
| PGSC0003DMT400078534 | Potato | endoplasmic reticulum, golgi, plasma membrane | 48.68 | 11.46 |
| GSMUA_Achr6P01360_001 | Banana | mitochondrion | 52.63 | 11.17 |
| PGSC0003DMT400078582 | Potato | mitochondrion | 53.95 | 10.54 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400025204 | EnsemblPlantsGene:PGSC0003DMG400009741 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF91 | PFAM:PF01569 | PGSC:PGSC0003DMG400009741 | SUPFAM:SSF48317 | TMHMM:TMhelix | UniParc:UPI0002960C01 |
| UniProt:M1AL56 | MapMan:5.2.2.1 | : | : | : | : |
Description
Phosphatidic acid phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400009741]
Coordinates
chr4:+:16831993..16832658
Molecular Weight (calculated)
8563.4 Da
IEP (calculated)
7.738
GRAVY (calculated)
0.291
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MFSRSAFDRR GHAAKLCIVL LPLLFAALVG ISRIDDYWHH WTDVFTGSII GWAPHASIKM RENIELHSTS IGIDTV
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.