Factsheet for Solyc05g008820.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078418	Potato	plasma membrane	94.72	94.72
Solyc05g008810.2.1	Tomato	nucleus	86.02	86.02
Bra024900.1-P	Field mustard	plasma membrane	59.63	65.98
Bra017464.1-P	Field mustard	plasma membrane	59.94	64.77
CDY25943	Canola	plastid	62.73	62.54
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	60.87	62.03
KRH35886	Soybean	plasma membrane	64.91	62.02
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	65.53	61.88
GSMUA_Achr8P18310_001	Banana	plasma membrane	57.76	60.98
CDY41071	Canola	plasma membrane	60.87	59.94
AT2G01180.3	Thale cress	plasma membrane	61.18	59.7
OQU86360	Sorghum	plasma membrane	55.59	58.31
Solyc05g008800.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	53.42	57.14
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	55.28	56.87
Solyc04g025370.1.1	Tomato	endoplasmic reticulum	27.02	55.06
Zm00001d008592_P003	Maize	plasma membrane	54.66	52.07
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	61.8	51.42
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	52.48	51.37
TraesCS3B01G060600.1	Wheat	peroxisome	52.48	51.37
Solyc04g025400.2.1	Tomato	mitochondrion, plasma membrane	49.07	49.84
CDY57516	Canola	plasma membrane	30.12	48.26
TraesCS3D01G051000.3	Wheat	plasma membrane	53.11	45.12
HORVU3Hr1G008430.3	Barley	plastid	52.17	44.33
VIT_01s0011g04170.t01	Wine grape	plasma membrane	69.25	44.07
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.88	42.53

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0008195	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311
GO:GO:0016787	UniProt:K4BX56	InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138
InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317	EnsemblPlantsGene:Solyc05g008820.2	EnsemblPlants:Solyc05g008820.2.1
TMHMM:TMhelix	UniParc:UPI0002766699	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:+:3052180..3055426

Molecular Weight (calculated)

36405.2 Da

IEP (calculated)

8.473

GRAVY (calculated)

0.105

Length

322 amino acids

Sequence
(BLAST)

001: MSWKNKIRAV FQGNTHEIER GCGHTIKSHG LSVARIHIHD WLILLLLVVI AIVLNVIGPF HRFVGKDMMT DLKYPMKDNT VPAWSIPLYA VLLPIIIFVF
101: IYLRRKDVYD LHHSILGILF AILITAVVTE AIKNGVGRPR PDFFWRCFPD GKDEYDRWGN VKCHGKESDI KEGHKSFPSG HTSASFAGLG FLSLYLAGKI
201: KAFDRRGHIA KLCIVFLPLL MASLVGVSRV DDYWHHWQDV FAGGLIGLFV AAFCYLQFFP APYHTEGWGP YAYFRAVEEV RVSRQHATPT NGGVEVEHSE
301: VQLNQQSGTT TIAFEDVENG RI

Best Arabidopsis Sequence Match ( AT3G02600.6 )
(BLAST)

001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.