CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017464.1-P	Field mustard	plasma membrane	90.21	98.99
CDY25943	Canola	plastid	92.35	93.5
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	85.63	88.61
AT2G01180.3	Thale cress	plasma membrane	84.4	83.64
CDY57516	Canola	plasma membrane	48.32	78.61
Solyc05g008810.2.1	Tomato	nucleus	60.24	61.18
PGSC0003DMT400078535	Potato	plasma membrane	60.24	61.18
Solyc05g008820.2.1	Tomato	plasma membrane	59.94	60.87
PGSC0003DMT400078418	Potato	plasma membrane	59.33	60.25
KRH35886	Soybean	plasma membrane	60.55	58.75
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	60.86	58.36
CDX81695	Canola	plasma membrane	54.43	56.51
CDX92005	Canola	plasma membrane	55.35	56.39
CDY33719	Canola	plasma membrane	53.52	56.09
GSMUA_Achr8P18310_001	Banana	plasma membrane	51.99	55.74
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	54.43	55.45
OQU86360	Sorghum	plasma membrane	50.46	53.75
CDX92215	Canola	golgi	49.54	53.11
CDY24441	Canola	golgi	49.24	52.79
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	48.93	51.12
CDY43231	Canola	golgi, peroxisome, plasma membrane	56.27	50.83
CDY57538	Canola	golgi, plasma membrane, plastid	55.35	50.0
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	50.15	49.85
TraesCS3B01G060600.1	Wheat	peroxisome	49.54	49.24
Zm00001d008592_P003	Maize	plasma membrane	50.15	48.52
TraesCS3D01G051000.3	Wheat	plasma membrane	51.38	44.33
HORVU3Hr1G008430.3	Barley	plastid	49.54	42.74
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.08	38.37
VIT_01s0011g04170.t01	Wine grape	plasma membrane	59.02	38.14
CDX94616	Canola	cytosol, golgi, nucleus	17.74	31.35

Protein Annotations

KEGG:00051+3.1.3.-	KEGG:00332+3.1.3.-	KEGG:00565+3.1.3.-	KEGG:00600+3.1.3.-	KEGG:00730+3.1.3.-	KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-	Gene3D:1.20.144.10	MapMan:5.2.2.1	GO:A0A078HTR3	UniProt:A0A078HTR3	EnsemblPlants:CDY41071
ProteinID:CDY41071	ProteinID:CDY41071.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00072389001
InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase
SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0004EE356C	SEG:seg	:

Description

BnaA09g18500DBnaA09g18500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTR3]

Coordinates

chrLK032489:-:162195..163459

Molecular Weight (calculated)

36875.7 Da

IEP (calculated)

8.212

GRAVY (calculated)

0.012

Length

327 amino acids

Sequence
(BLAST)

001: MNCIPLLRSS KSETSNPINL QEQEPQRGRM QEIDLGIHTI RSHGVGVASK HKHDWIILVI LVAIEIGLQL ISPFYRYVGR DMMTDLKYPF NDNTVPVWSV
101: PIYAVLLPII VFVCFYMKRT CVYDLHHSIL GLLFTVLITG IITDSIKLAT GRPRPNFYWR CFPDGNEVYN ALGGVICHGK PGEVKEGHKS FPSGHTSWSF
201: AGLGYLSLYL SGKVKAFNRE GHVAKLCLVF APLLAACLVG ISRVDDYWHH WQDVFAGALI GLFVAAFCYR QFYPNPYHEE GWGPYAYFRA AQERGQAQNG
301: DVLRTMSLQV EPTSLENMES GTSSVRR

Best Arabidopsis Sequence Match ( AT2G01180.3 )
(BLAST)

001: MNCIPLLLSS KPEMSSPNPQ DQEAQRGRMQ EIDLSVHTIK SHGGRVASKH KHDWIILVIL IAIEIGLNLI SPFYRYVGKD MMTDLKYPFK DNTVPIWSVP
101: VYAVLLPIIV FVCFYLKRTC VYDLHHSILG LLFAVLITGV ITDSIKVATG RPRPNFYWRC FPDGKELYDA LGGVVCHGKA AEVKEGHKSF PSGHTSWSFA
201: GLTFLSLYLS GKIKAFNNEG HVAKLCLVIF PLLAACLVGI SRVDDYWHHW QDVFAGALIG TLVAAFCYRQ FYPNPYHEEG WGPYAYFKAA QERGVPVTSS
301: QNGDALRAMS LQMDSTSLEN MESGTSTAPR

Arabidopsis Description

ATPAP1phosphatidic acid phosphatase 1 [Source:TAIR;Acc:AT2G01180]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.