Factsheet for Bra017464.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024900.1-P	Field mustard	plasma membrane	90.27	92.44
CDY41071	Canola	plasma membrane	98.99	90.21
AT2G01180.3	Thale cress	plasma membrane	86.91	78.48
Solyc05g008810.2.1	Tomato	nucleus	65.1	60.25
PGSC0003DMT400078535	Potato	plasma membrane	65.1	60.25
Solyc05g008820.2.1	Tomato	plasma membrane	64.77	59.94
PGSC0003DMT400078418	Potato	plasma membrane	64.09	59.32
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	65.77	57.48
KRH35886	Soybean	plasma membrane	64.77	57.27
Bra001056.1-P	Field mustard	plasma membrane	56.71	56.15
Bra026782.1-P	Field mustard	plasma membrane	58.05	55.45
GSMUA_Achr8P18310_001	Banana	plasma membrane	56.71	55.41
Bra022295.1-P	Field mustard	golgi	54.03	52.79
OQU86360	Sorghum	plasma membrane	54.03	52.44
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	60.4	50.85
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	53.02	50.48
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	54.03	48.94
TraesCS3B01G060600.1	Wheat	peroxisome	53.36	48.33
Zm00001d008592_P003	Maize	plasma membrane	54.36	47.93
TraesCS3D01G051000.3	Wheat	plasma membrane	54.7	43.01
HORVU3Hr1G008430.3	Barley	plastid	53.36	41.95
VIT_01s0011g04170.t01	Wine grape	plasma membrane	64.43	37.94
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.11	37.24

Protein Annotations

EnsemblPlants:Bra017464.1	EnsemblPlants:Bra017464.1-P	EnsemblPlantsGene:Bra017464	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:LPP1/LPP2/LPP3_plant	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138
PFAM:PF01569	SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0002542358
UniProt:M4DLT3	MapMan:5.2.2.1	:	:	:	:

Description

AT2G01180 (E=4e-153) ATPAP1, PAP1, LPP1, ATLPP1 | ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1); phosphatidate phosphatase

Coordinates

chrA09:+:15617843..15618739

Molecular Weight (calculated)

33566.7 Da

IEP (calculated)

8.277

GRAVY (calculated)

0.122

Length

298 amino acids

Sequence
(BLAST)

001: MQEIDLAIHT IRSHGAGVAS KHKHDWIILV ILVAIEIGLQ LISPFYRYVG RDMMTDLKYP FNDNTVPVWS VPIYAVLLPI IVFVCFYMKR TCVYDLHHSI
101: LGLLFTVLIT GIITDSIKLA TGRPRPNFYW RCFPDGKEVY NALGGVICHG KPGEVKEGHK SFPSGHTSWS FAGLGYLSLY LSGKVKAFNR EGHVAKLCLV
201: FAPLLAACLV GISRVDDYWH HWQDVFAGAL IGLFVAAFCY RQFYPNPYHE EGWGPYAYFR AAQERGQAQN GDVLRTMSLQ VEPTSLENME SGTSSVRR

Best Arabidopsis Sequence Match ( AT2G01180.6 )
(BLAST)

001: MSSPNPQDQE AQRGRMQEID LSVHTIKSHG GRVASKHKHD WIILVILIAI EIGLNLISPF YRYVGKDMMT DLKYPFKDNT VPIWSVPVYA VLLPIIVFVC
101: FYLKRTCVYD LHHSILGLLF AVLITGVITD SIKVATGRPR PNFYWRCFPD GKELYDALGG VVCHGKAAEV KEGHKSFPSG HTSWSFAGLT FLSLYLSGKI
201: KAFNNEGHVA KLCLVIFPLL AACLVGISRV DDYWHHWQDV FAGALIGTLV AAFCYRQFYP NPYHEEGWGP YAYFKAAQER GVPVTSSQNG DALRAMSLQM
301: DSTSLENMES GTSTAPR

Arabidopsis Description

ATPAP1phosphatidic acid phosphatase 1 [Source:TAIR;Acc:AT2G01180]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.