Factsheet for Bra024900.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	99.66	91.77
Bra017464.1-P	Field mustard	plasma membrane	92.44	90.27
AT2G01180.3	Thale cress	plasma membrane	88.32	77.88
CDY57516	Canola	plasma membrane	51.2	74.13
Solyc05g008810.2.1	Tomato	nucleus	67.01	60.56
PGSC0003DMT400078535	Potato	plasma membrane	67.01	60.56
Solyc05g008820.2.1	Tomato	plasma membrane	65.98	59.63
PGSC0003DMT400078418	Potato	plasma membrane	65.98	59.63
GSMUA_Achr8P18310_001	Banana	plasma membrane	60.48	57.7
Bra001056.1-P	Field mustard	plasma membrane	59.45	57.48
KRH35886	Soybean	plasma membrane	66.32	57.27
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	67.01	57.18
Bra026782.1-P	Field mustard	plasma membrane	59.11	55.13
Bra022295.1-P	Field mustard	golgi	56.7	54.1
OQU86360	Sorghum	plasma membrane	57.04	54.07
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	56.7	52.72
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	63.57	52.26
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	56.01	49.54
Zm00001d008592_P003	Maize	plasma membrane	57.04	49.11
TraesCS3B01G060600.1	Wheat	peroxisome	55.33	48.94
TraesCS3D01G051000.3	Wheat	plasma membrane	56.7	43.54
HORVU3Hr1G008430.3	Barley	plastid	54.64	41.95
VIT_01s0011g04170.t01	Wine grape	plasma membrane	65.29	37.55
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.01	36.86

Protein Annotations

EnsemblPlants:Bra024900.1	EnsemblPlants:Bra024900.1-P	EnsemblPlantsGene:Bra024900	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:LPP1/LPP2/LPP3_plant	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138
PFAM:PF01569	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI000253FA0B	UniProt:M4E7Z4
MapMan:5.2.2.1	:	:	:	:	:

Description

AT2G01180 (E=1e-152) ATPAP1, PAP1, LPP1, ATLPP1 | ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1); phosphatidate phosphatase

Coordinates

chrA06:+:24188572..24189447

Molecular Weight (calculated)

32648.6 Da

IEP (calculated)

7.367

GRAVY (calculated)

0.155

Length

291 amino acids

Sequence
(BLAST)

001: MQEIDLGIHT IRSHGGGLAS KHKHDWIILV ILVAIEIGLQ LISPFYRYVG KDMMTDLKYP FNDNTIPVWS VPIYAVLLPI IIFVCFYMKR TCVYDLHHSI
101: LGLLFTVLIT GIITDSIKLA TGRPRPNFYW RCFPDGKELF DALGGVVCHG EPGEVKEGHK SFPSGHTSWS FAGLGFLSLY LSGKLKAFNR EGHVAKLCIV
201: FAPLLAACLV GISRVDDYWH HWQDVFAGGL IGLFVAAFCY RQFYPNPYHE EGWGPYAYFI AAQERGQQQN GDALRTVSLE NMESGTSTAP R

Best Arabidopsis Sequence Match ( AT2G01180.8 )
(BLAST)

001: MTIGSFFSSL LFWRNSQDQE AQRGRMQEID LSVHTIKSHG GRVASKHKHD WIILVILIAI EIGLNLISPF YRYVGKDMMT DLKYPFKDNT VPIWSVPVYA
101: VLLPIIVFVC FYLKRTCVYD LHHSILGLLF AVLITGVITD SIKVATGRPR PNFYWRCFPD GKELYDALGG VVCHGKAAEV KEGHKSFPSG HTSWSFAGLT
201: FLSLYLSGKI KAFNNEGHVA KLCLVIFPLL AACLVGISRV DDYWHHWQDV FAGALIGTLV AAFCYRQFYP NPYHEEGWGP YAYFKAAQER GVPVTSSQNG
301: DALRAMSLQM DSTSLENMES GTSTAPR

Arabidopsis Description

ATPAP1phosphatidic acid phosphatase 1 [Source:TAIR;Acc:AT2G01180]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.