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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum, mitochondrion

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, mitochondrion, plasma membrane
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:golgi
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024900.1-P Field mustard plasma membrane 91.77 99.66
CDY25943 Canola plastid 91.46 89.47
CDY57516 Canola plasma membrane 55.38 87.06
CDY41071 Canola plasma membrane 88.61 85.63
AT2G01180.3 Thale cress plasma membrane 84.49 80.91
Solyc05g008810.2.1 Tomato nucleus 62.97 61.8
PGSC0003DMT400078535 Potato plasma membrane 62.97 61.8
Solyc05g008820.2.1 Tomato plasma membrane 62.03 60.87
PGSC0003DMT400078418 Potato plasma membrane 62.03 60.87
KRH35886 Soybean plasma membrane 62.66 58.75
KRG90908 Soybean endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane 63.29 58.65
GSMUA_Achr8P18310_001 Banana plasma membrane 56.01 58.03
CDX92005 Canola plasma membrane 58.86 57.94
CDX74243 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 57.91 57.01
CDX81695 Canola plasma membrane 55.38 55.56
CDY33719 Canola plasma membrane 54.43 55.13
OQU86360 Sorghum plasma membrane 53.16 54.72
CDX92215 Canola golgi 52.53 54.43
CDY24441 Canola golgi 52.22 54.1
CDY43231 Canola golgi, peroxisome, plasma membrane 60.76 53.04
Os01t0139600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 52.53 53.04
CDY57538 Canola golgi, plasma membrane, plastid 60.13 52.49
TraesCS3A01G052100.2 Wheat endoplasmic reticulum, golgi, plasma membrane 52.85 50.76
TraesCS3B01G060600.1 Wheat peroxisome 52.22 50.15
Zm00001d008592_P003 Maize plasma membrane 53.16 49.7
TraesCS3D01G051000.3 Wheat plasma membrane 54.43 45.38
HORVU3Hr1G008430.3 Barley plastid 51.9 43.27
VIT_01s0011g04170.t01 Wine grape plasma membrane 60.44 37.75
VIT_01s0011g04160.t01 Wine grape cytosol, peroxisome, plasma membrane 62.97 37.62
CDX94616 Canola cytosol, golgi, nucleus 19.3 32.97
Protein Annotations
KEGG:00051+3.1.3.-KEGG:00332+3.1.3.-KEGG:00565+3.1.3.-KEGG:00600+3.1.3.-KEGG:00730+3.1.3.-KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-Gene3D:1.20.144.10MapMan:5.2.2.1GO:A0A078FXD9UniProt:A0A078FXD9EnsemblPlants:CDY17691
ProteinID:CDY17691ProteinID:CDY17691.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00001911001
InterPro:LPP1/LPP2/LPP3_plantPFAM:PF01569PANTHER:PTHR10165PANTHER:PTHR10165:SF138InterPro:P_Acid_Pase_2/haloperoxi_sfInterPro:P_Acid_Pase_2/haloperoxidase
SMART:SM00014SUPFAM:SSF48317TMHMM:TMhelixUniParc:UPI0004EECFE1::
Description
BnaA06g35100DBnaA06g35100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXD9]
Coordinates
chrLK032076:+:613254..614443
Molecular Weight (calculated)
35489.0 Da
IEP (calculated)
7.609
GRAVY (calculated)
0.100
Length
316 amino acids
Sequence
(BLAST)
001: MVLGSLFAPL KFWGNTQEQE PQRGRMQEID LGIHTIRSHG GGLASKHKHD WIILVILVAI EIGLQLISPF YRYVGKDMMT DLKYPFNDNT IPVWSVPIYA
101: VLLPIIIFVC FYVKRTCVYD LHHSILGLLF TVLITGIITD SIKLATGRPR PNFYWRCFPD GKELFDALGG VVCHGEPGEV KEGHKSFPSG HTSWSFAGLG
201: FLSLYLSGKL KAFNREGHVA KLCIVFAPLL AACLVGISRV DDYWHHWQDV FAGGLIGLFV AAFCYRQFYP NPYHEEGWGP YAYFIAAQER GQQQNGDALR
301: TVSLENMESG TSTAPR
Best Arabidopsis Sequence Match ( AT2G01180.8 )
(BLAST)
001: MTIGSFFSSL LFWRNSQDQE AQRGRMQEID LSVHTIKSHG GRVASKHKHD WIILVILIAI EIGLNLISPF YRYVGKDMMT DLKYPFKDNT VPIWSVPVYA
101: VLLPIIVFVC FYLKRTCVYD LHHSILGLLF AVLITGVITD SIKVATGRPR PNFYWRCFPD GKELYDALGG VVCHGKAAEV KEGHKSFPSG HTSWSFAGLT
201: FLSLYLSGKI KAFNNEGHVA KLCLVIFPLL AACLVGISRV DDYWHHWQDV FAGALIGTLV AAFCYRQFYP NPYHEEGWGP YAYFKAAQER GVPVTSSQNG
301: DALRAMSLQM DSTSLENMES GTSTAPR
Arabidopsis Description
ATPAP1phosphatidic acid phosphatase 1 [Source:TAIR;Acc:AT2G01180]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.