CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41071	Canola	plasma membrane	93.5	92.35
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	89.47	91.46
CDY57516	Canola	plasma membrane	51.39	82.59
AT2G01180.3	Thale cress	plasma membrane	82.66	80.91
PGSC0003DMT400078535	Potato	plasma membrane	63.16	63.35
Solyc05g008810.2.1	Tomato	nucleus	63.16	63.35
Solyc05g008820.2.1	Tomato	plasma membrane	62.54	62.73
PGSC0003DMT400078418	Potato	plasma membrane	61.92	62.11
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	63.16	59.82
KRH35886	Soybean	plasma membrane	62.23	59.64
CDX92005	Canola	plasma membrane	56.97	57.32
GSMUA_Achr8P18310_001	Banana	plasma membrane	53.56	56.72
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	56.04	56.39
CDX81695	Canola	plasma membrane	54.8	56.19
CDY33719	Canola	plasma membrane	53.87	55.77
CDX92215	Canola	golgi	50.46	53.44
CDY24441	Canola	golgi	50.15	53.11
OQU86360	Sorghum	plasma membrane	50.46	53.09
CDY43231	Canola	golgi, peroxisome, plasma membrane	59.13	52.76
CDY57538	Canola	golgi, plasma membrane, plastid	58.2	51.93
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	49.85	51.44
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	50.46	49.54
TraesCS3B01G060600.1	Wheat	peroxisome	49.85	48.94
Zm00001d008592_P003	Maize	plasma membrane	50.46	48.22
TraesCS3D01G051000.3	Wheat	plasma membrane	51.7	44.06
HORVU3Hr1G008430.3	Barley	plastid	49.85	42.48
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.78	38.94
VIT_01s0011g04170.t01	Wine grape	plasma membrane	60.37	38.54
CDX94616	Canola	cytosol, golgi, nucleus	17.65	30.81

Protein Annotations

KEGG:00051+3.1.3.-	KEGG:00332+3.1.3.-	KEGG:00565+3.1.3.-	KEGG:00600+3.1.3.-	KEGG:00730+3.1.3.-	KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-	Gene3D:1.20.144.10	MapMan:5.2.2.1	GO:A0A078GMU2	UniProt:A0A078GMU2	EnsemblPlants:CDY25943
ProteinID:CDY25943	ProteinID:CDY25943.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00033450001
InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase
SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0004EF0639	SEG:seg	:

Description

BnaC09g20440DBnaC09g20440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMU2]

Coordinates

chrLK032183:+:235610..237701

Molecular Weight (calculated)

36607.3 Da

IEP (calculated)

8.544

GRAVY (calculated)

0.031

Length

323 amino acids

Sequence
(BLAST)

001: MVFGSFFSSL KFWGNSQEQE PQRGRMQEID LGIHTIRSHG GSVASKHKHD WIILVILVAI EIGLQLISPF YRYVGRDMMT DLKYPFNDNT VPVWSVPIYA
101: VLLPIIIFVW FYMKRTCVYD LHHSILGLLF TVLITGIITD SIKLATGRPR PNFYWRCFPD GKEVYNALGG VICHGKPGEV KEGHKSFPSG HTSWSFAGLG
201: YLSLYLSGKV KAFNREGHVA KLCIVFAPLL AACLVGISRV DDYWHHWQDV FAGALIGLFV AAFCYRQFYP NPYHEEGWGP YAYFRAVQER GQAHNGDALR
301: TMSLQVEPTS LENMESGTSS VRR

Best Arabidopsis Sequence Match ( AT2G01180.8 )
(BLAST)

001: MTIGSFFSSL LFWRNSQDQE AQRGRMQEID LSVHTIKSHG GRVASKHKHD WIILVILIAI EIGLNLISPF YRYVGKDMMT DLKYPFKDNT VPIWSVPVYA
101: VLLPIIVFVC FYLKRTCVYD LHHSILGLLF AVLITGVITD SIKVATGRPR PNFYWRCFPD GKELYDALGG VVCHGKAAEV KEGHKSFPSG HTSWSFAGLT
201: FLSLYLSGKI KAFNNEGHVA KLCLVIFPLL AACLVGISRV DDYWHHWQDV FAGALIGTLV AAFCYRQFYP NPYHEEGWGP YAYFKAAQER GVPVTSSQNG
301: DALRAMSLQM DSTSLENMES GTSTAPR

Arabidopsis Description

ATPAP1phosphatidic acid phosphatase 1 [Source:TAIR;Acc:AT2G01180]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.