Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G052100.2 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 80.47 | 92.71 |
| TraesCS3B01G060600.1 | Wheat | peroxisome | 79.95 | 92.1 |
| TraesCS3D01G051000.3 | Wheat | plasma membrane | 82.59 | 82.59 |
| OQU86360 | Sorghum | plasma membrane | 65.96 | 81.43 |
| Os01t0139600-01 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 61.21 | 74.12 |
| Zm00001d008592_P003 | Maize | plasma membrane | 65.7 | 73.67 |
| VIT_14s0006g02480.t01 | Wine grape | plasma membrane | 36.41 | 68.66 |
| GSMUA_Achr8P18310_001 | Banana | plasma membrane | 49.6 | 61.64 |
| Bra001056.1-P | Field mustard | plasma membrane | 45.12 | 56.81 |
| CDX74243 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 48.02 | 56.7 |
| CDX92005 | Canola | plasma membrane | 47.76 | 56.39 |
| Bra024900.1-P | Field mustard | plasma membrane | 41.95 | 54.64 |
| Bra017464.1-P | Field mustard | plasma membrane | 41.95 | 53.36 |
| KRH35886 | Soybean | plasma membrane | 47.23 | 53.12 |
| Solyc05g008810.2.1 | Tomato | nucleus | 45.12 | 53.11 |
| PGSC0003DMT400078535 | Potato | plasma membrane | 45.12 | 53.11 |
| KRG90908 | Soybean | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane | 47.23 | 52.49 |
| CDY43231 | Canola | golgi, peroxisome, plasma membrane | 50.13 | 52.49 |
| PGSC0003DMT400078418 | Potato | plasma membrane | 44.59 | 52.48 |
| Solyc05g008820.2.1 | Tomato | plasma membrane | 44.33 | 52.17 |
| Bra039179.1-P | Field mustard | endoplasmic reticulum, golgi, peroxisome | 48.55 | 51.98 |
| CDY57538 | Canola | golgi, plasma membrane, plastid | 49.6 | 51.93 |
| CDY17691 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 43.27 | 51.9 |
| KRH01709 | Soybean | mitochondrion | 51.19 | 51.87 |
| AT3G02600.1 | Thale cress | plasma membrane | 48.81 | 50.82 |
| HORVU7Hr1G081700.5 | Barley | plasma membrane | 42.22 | 50.31 |
| AT2G01180.3 | Thale cress | plasma membrane | 43.54 | 50.0 |
| CDY25943 | Canola | plastid | 42.48 | 49.85 |
| CDY41071 | Canola | plasma membrane | 42.74 | 49.54 |
| Solyc02g086370.2.1 | Tomato | mitochondrion, plasma membrane | 50.13 | 49.1 |
| PGSC0003DMT400078582 | Potato | mitochondrion | 50.13 | 48.84 |
| HORVU3Hr1G064450.7 | Barley | peroxisome, plasma membrane | 40.9 | 48.74 |
| HORVU3Hr1G060600.6 | Barley | plasma membrane | 41.95 | 45.82 |
| HORVU1Hr1G082900.12 | Barley | peroxisome | 40.11 | 43.68 |
| HORVU7Hr1G014130.1 | Barley | plastid | 42.22 | 43.48 |
| HORVU5Hr1G055070.2 | Barley | plastid | 41.69 | 40.51 |
| CDY57516 | Canola | plasma membrane | 20.05 | 37.81 |
| VIT_01s0011g04170.t01 | Wine grape | plasma membrane | 46.97 | 35.18 |
| VIT_01s0011g04160.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 49.08 | 35.16 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G008430.3 | EnsemblPlantsGene:HORVU3Hr1G008430 | Gene3D:1.20.144.10 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 | PANTHER:PTHR10165:SF80 |
| PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TMHMM:TMhelix | UniParc:UPI000B46018A |
| UniProt:A0A287K249 | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:19067785..19070907
Molecular Weight (calculated)
42488.4 Da
IEP (calculated)
10.080
GRAVY (calculated)
-0.129
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: LVPACPLPHV SHHGRPRGSQ PAFPPAARRR PPPLRRRRKS PLPFRRHPPL PLQGFNSQNY SQTTEALGTP VSGQQDRMQQ VQHTVQTHGY GLARKHTYDW
101: VVLILLAAVV VVLHYAPPFN RFVGKDIMTD IRYPVKQSTV PAWAVPVISM LCPVLVFIAL YVARRDVYDL HHATLGVIFA VMITAAFTDV IKNAVGRPRP
201: DFFWRCFPDG RQVYDQVTGG VICHGKKGFL TDGRKSFPSG HTSWSFAGFG FLSLYLSGKI QAFDRKGHVA KLCIVILPLL LASLVGISRI DNYRHHWEDV
301: FVGGLIGYIV AVLCYLHFFP PPYHHQGWGP YAYFHMLEEL EAANSNNAQN QQPAGEHHIG LTGQHHNGRS RNDLESGTV
101: VVLILLAAVV VVLHYAPPFN RFVGKDIMTD IRYPVKQSTV PAWAVPVISM LCPVLVFIAL YVARRDVYDL HHATLGVIFA VMITAAFTDV IKNAVGRPRP
201: DFFWRCFPDG RQVYDQVTGG VICHGKKGFL TDGRKSFPSG HTSWSFAGFG FLSLYLSGKI QAFDRKGHVA KLCIVILPLL LASLVGISRI DNYRHHWEDV
301: FVGGLIGYIV AVLCYLHFFP PPYHHQGWGP YAYFHMLEEL EAANSNNAQN QQPAGEHHIG LTGQHHNGRS RNDLESGTV
001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.