Factsheet for Bra001056.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
plastid 1
extracellular 1
vacuole 1
plasma membrane 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	100.0	93.77
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	92.03	78.25
AT3G02600.1	Thale cress	plasma membrane	88.37	73.08
VIT_14s0006g02480.t01	Wine grape	plasma membrane	48.51	72.64
Bra024900.1-P	Field mustard	plasma membrane	57.48	59.45
GSMUA_Achr8P18310_001	Banana	plasma membrane	57.48	56.72
Bra017464.1-P	Field mustard	plasma membrane	56.15	56.71
OQU86360	Sorghum	plasma membrane	57.48	56.35
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	57.81	55.59
KRH01709	Soybean	mitochondrion	68.77	55.35
Bra026782.1-P	Field mustard	plasma membrane	57.14	55.13
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	57.48	52.58
Bra022295.1-P	Field mustard	golgi	52.49	51.8
Zm00001d008592_P003	Maize	plasma membrane	57.48	51.18
TraesCS3B01G060600.1	Wheat	peroxisome	55.81	51.06
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	64.12	49.87
PGSC0003DMT400078582	Potato	mitochondrion	64.12	49.61
TraesCS3D01G051000.3	Wheat	plasma membrane	57.81	45.91
HORVU3Hr1G008430.3	Barley	plastid	56.81	45.12

Protein Annotations

EnsemblPlants:Bra001056.1	EnsemblPlants:Bra001056.1-P	EnsemblPlantsGene:Bra001056	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:LPP1/LPP2/LPP3_plant	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138
PFAM:PF01569	SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI00025408CF
UniProt:M4CA27	MapMan:5.2.2.1	:	:	:	:

Description

AT3G02600 (E=2e-109) LPP3, ATLPP3 | LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase

Coordinates

chrA03:+:14552256..14553826

Molecular Weight (calculated)

33774.1 Da

IEP (calculated)

7.074

GRAVY (calculated)

0.142

Length

301 amino acids

Sequence
(BLAST)

001: MMREAHQSTH TVRSHGMTLA RTHMHDWIIL VLLVILECIL LIIHPFYRFV GKDMMTDLSY PLKSNTVPIW SVPVYAMLLP LAIFIFIYFR RRDVYDLHHA
101: VLGLLYSVLV TAVLTDSIKN AVGRPRPDFF WRCFPDGKAV YDALGDVICH GDKSVIREGH KSFPSGHTSW SFAGLGFLSL YLSGKIRAFD GKGHVAKLCI
201: VILPLLVAAL VGISRVDDYW HHWQDVFAGG LLAWGPYAYF LVLEAARAQA QAAENEMAQR PPQGDNGEEE DGGFMGLHLV DNPSMRREEA DVEAGRVPSR
301: G

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.