Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, mitochondrion, plasma membrane
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001056.1-P Field mustard plasma membrane 93.77 100.0
CDX92005 Canola plasma membrane 97.2 97.2
CDY43231 Canola golgi, peroxisome, plasma membrane 92.83 82.32
CDY57538 Canola golgi, plasma membrane, plastid 91.59 81.22
VIT_14s0006g02480.t01 Wine grape plasma membrane 49.53 79.1
AT3G02600.1 Thale cress plasma membrane 87.85 77.47
GSMUA_Achr8P18310_001 Banana plasma membrane 57.63 60.66
OQU86360 Sorghum plasma membrane 57.01 59.61
KRH01709 Soybean mitochondrion 68.85 59.09
CDX81695 Canola plasma membrane 57.94 59.05
CDY33719 Canola plasma membrane 57.32 58.97
Os01t0139600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 57.32 58.79
CDY17691 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 57.01 57.91
CDY25943 Canola plastid 56.39 56.04
TraesCS3A01G052100.2 Wheat endoplasmic reticulum, golgi, plasma membrane 57.01 55.62
CDY24441 Canola golgi 52.34 55.08
CDX92215 Canola golgi 52.02 54.75
CDY41071 Canola plasma membrane 55.45 54.43
Zm00001d008592_P003 Maize plasma membrane 57.01 54.14
TraesCS3B01G060600.1 Wheat peroxisome 55.45 54.1
Solyc02g086370.2.1 Tomato mitochondrion, plasma membrane 64.49 53.49
PGSC0003DMT400078582 Potato mitochondrion 64.17 52.96
TraesCS3D01G051000.3 Wheat plasma membrane 57.32 48.55
HORVU3Hr1G008430.3 Barley plastid 56.7 48.02
CDY57516 Canola plasma membrane 25.86 41.29
CDX94616 Canola cytosol, golgi, nucleus 19.63 34.05
Protein Annotations
KEGG:00051+3.1.3.-KEGG:00332+3.1.3.-KEGG:00565+3.1.3.-KEGG:00600+3.1.3.-KEGG:00730+3.1.3.-KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-Gene3D:1.20.144.10MapMan:5.2.2.1GO:A0A078CGY8EnsemblPlants:CDX74243ProteinID:CDX74243
ProteinID:CDX74243.1EnsemblPlantsGene:GSBRNA2T00112024001InterPro:LPP1/LPP2/LPP3_plantPFAM:PF01569PANTHER:PTHR10165PANTHER:PTHR10165:SF138
InterPro:P_Acid_Pase_2/haloperoxi_sfInterPro:P_Acid_Pase_2/haloperoxidaseSMART:SM00014SUPFAM:SSF48317TMHMM:TMhelixUniParc:UPI0004EE784F
SEG:seg:::::
Description
BnaA03g28040D
Coordinates
chrLK031800:-:1926600..1928991
Molecular Weight (calculated)
36086.9 Da
IEP (calculated)
7.068
GRAVY (calculated)
0.157
Length
321 amino acids
Sequence
(BLAST)
001: MMREAHQSTH TVRSHGMTLA RTHMHDWIIL VLLVILECIL LIIHPFYRFV GKDMMTDLSY PLKSNTVPIW SVPVYAMLLP LAIFIFIYFR RRDVYDLHHA
101: VLGLLYSVLV TAVLTDSIKN AVGRPRPDFF WRCFPDGKAV YDALGDVICH GDKSVIREGH KSFPSGHTSW SFAGLGFLSL YLSGKIRAFD GKGHVAKLCI
201: VILPLLVAAL VGISRVDDYW HHWQDVFAGG LLGIVVSTIC YLQFFPPPYR TEAWGPYAYF LVLEAARAQA QAAENEMAQR PPQGDNGEEE DGGFMGLHLV
301: DNPSMRREEA DVEAGRVPSR G
Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)
001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.