CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
golgi 1
plasma membrane 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	97.2	97.2
CDY43231	Canola	golgi, peroxisome, plasma membrane	93.15	82.6
CDY57538	Canola	golgi, plasma membrane, plastid	92.21	81.77
VIT_14s0006g02480.t01	Wine grape	plasma membrane	50.16	80.1
AT3G02600.1	Thale cress	plasma membrane	88.78	78.3
GSMUA_Achr8P18310_001	Banana	plasma membrane	57.94	60.98
CDX81695	Canola	plasma membrane	59.5	60.63
CDY33719	Canola	plasma membrane	58.88	60.58
KRH01709	Soybean	mitochondrion	69.78	59.89
OQU86360	Sorghum	plasma membrane	57.01	59.61
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	57.94	58.86
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	57.32	58.79
CDY25943	Canola	plastid	57.32	56.97
CDY24441	Canola	golgi	52.65	55.41
CDY41071	Canola	plasma membrane	56.39	55.35
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	56.7	55.32
CDX92215	Canola	golgi	52.34	55.08
TraesCS3B01G060600.1	Wheat	peroxisome	55.76	54.41
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	65.42	54.26
Zm00001d008592_P003	Maize	plasma membrane	57.01	54.14
PGSC0003DMT400078582	Potato	mitochondrion	65.11	53.73
TraesCS3D01G051000.3	Wheat	plasma membrane	57.01	48.28
HORVU3Hr1G008430.3	Barley	plastid	56.39	47.76
CDY57516	Canola	plasma membrane	25.86	41.29
CDX94616	Canola	cytosol, golgi, nucleus	19.63	34.05

Protein Annotations

KEGG:00051+3.1.3.-	KEGG:00332+3.1.3.-	KEGG:00565+3.1.3.-	KEGG:00600+3.1.3.-	KEGG:00730+3.1.3.-	KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-	Gene3D:1.20.144.10	MapMan:5.2.2.1	GO:A0A078DRT2	EnsemblPlants:CDX92005	ProteinID:CDX92005
ProteinID:CDX92005.1	EnsemblPlantsGene:GSBRNA2T00153660001	InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138
InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0004EE3CE1
SEG:seg	:	:	:	:	:

Description

BnaC03g33070D

Coordinates

chrLK031870:+:1220057..1222859

Molecular Weight (calculated)

36078.8 Da

IEP (calculated)

7.033

GRAVY (calculated)

0.140

Length

321 amino acids

Sequence
(BLAST)

001: MMREAQQGTH TVRSHGMTLA RTHMHDWIIL VLLVILECIL LIIHPFYRFV GKDMMTDLNY PLKSNTVPIW SVPVYAMLLP LAIFVFIYFR RRDVYDLHHA
101: VLGLLYSVLV TAVLTDSIKN AVGRPRPDFF WRCFPDGKAV YDSLGDVICH GDKSVIREGH KSFPSGHTSW SFAGLGFLSL YLSGKIRAFD GKGHVAKLCI
201: VILPLLVAAL VGISRVDDYW HHWQDVFAGG LLGLVVSTFC YLQFFPPPYR TEAWGPYAYF LVLEAARAQA QAAENEAVQR PPQGDNGEEE DGGFMGLHLV
301: DNPSMRREEA DVEAGRVPSR G

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.