CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	golgi, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	95.3	97.46
CDY43231	Canola	golgi, peroxisome, plasma membrane	96.96	96.96
CDX92005	Canola	plasma membrane	81.77	92.21
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	81.22	91.59
AT3G02600.1	Thale cress	plasma membrane	88.4	87.91
VIT_14s0006g02480.t01	Wine grape	plasma membrane	43.92	79.1
KRH01709	Soybean	mitochondrion	65.75	63.64
GSMUA_Achr8P18310_001	Banana	plasma membrane	53.04	62.95
CDY33719	Canola	plasma membrane	52.49	60.9
CDX81695	Canola	plasma membrane	52.76	60.63
OQU86360	Sorghum	plasma membrane	51.1	60.26
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	52.49	60.13
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	51.66	59.74
CDY25943	Canola	plastid	51.93	58.2
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	60.5	56.59
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	51.1	56.23
PGSC0003DMT400078582	Potato	mitochondrion	59.94	55.78
CDY24441	Canola	golgi	46.69	55.41
CDY41071	Canola	plasma membrane	50.0	55.35
CDX92215	Canola	golgi	46.41	55.08
Zm00001d008592_P003	Maize	plasma membrane	51.1	54.73
TraesCS3B01G060600.1	Wheat	peroxisome	49.45	54.41
HORVU3Hr1G008430.3	Barley	plastid	51.93	49.6
TraesCS3D01G051000.3	Wheat	plasma membrane	51.38	49.08
CDY57516	Canola	plasma membrane	24.59	44.28
CDX94616	Canola	cytosol, golgi, nucleus	17.68	34.59

Protein Annotations

KEGG:00051+3.1.3.-	KEGG:00332+3.1.3.-	KEGG:00565+3.1.3.-	KEGG:00600+3.1.3.-	KEGG:00730+3.1.3.-	KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-	Gene3D:1.20.144.10	MapMan:5.2.2.1	GO:A0A078J4P1	UniProt:A0A078J4P1	EnsemblPlants:CDY57538
ProteinID:CDY57538	ProteinID:CDY57538.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00022316001
InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase
SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0004EE5D63	SEG:seg	:

Description

BnaA05g33490DBnaA05g33490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4P1]

Coordinates

chrLK033583:-:41744..45030

Molecular Weight (calculated)

40435.9 Da

IEP (calculated)

6.718

GRAVY (calculated)

0.132

Length

362 amino acids

Sequence
(BLAST)

001: MPFPRFLNFG GIFQAVTNRG PEVSGTADNW VSPSDIPLIE PYSKEHKMRE AQLGAHTVRS HGMTLARTHM HDWIILVLLV VLECILLIIH PFYRFVSKDM
101: MTDLSFPLKS NTVPIWSVPV YAMLLPLVIF IAIYFRRRDV YDLHHAVLGL LYSVLVTAVL TDSIKNAVGR PRPDFFWRCF PDGKAFYDSL GDVICHGDKS
201: VIREGHKSFP SGHTSWSFAG LGFLSLYLSG KIQAFDGKGH VAKLCIVILP LLVAALVGIS RVDDYWHHWQ DVFAGGLLGL VVSTFCYLQF FPPPYHTEAW
301: GPYAYFQVLE AARAQAQAAE NGVAQGGNGE EEDGGFMGLH LVDNPSMRRE DEDVEAGRVP RG

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.