Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43231 | Canola | golgi, peroxisome, plasma membrane | 88.46 | 88.95 |
| CDX92005 | Canola | plasma membrane | 78.3 | 88.78 |
| CDY57538 | Canola | golgi, plasma membrane, plastid | 87.91 | 88.4 |
| Bra001056.1-P | Field mustard | plasma membrane | 73.08 | 88.37 |
| Bra039179.1-P | Field mustard | endoplasmic reticulum, golgi, peroxisome | 85.71 | 88.14 |
| CDX74243 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 77.47 | 87.85 |
| VIT_14s0006g02480.t01 | Wine grape | plasma membrane | 43.68 | 79.1 |
| AT1G15080.1 | Thale cress | plasma membrane | 51.37 | 64.48 |
| KRH01709 | Soybean | mitochondrion | 65.66 | 63.9 |
| GSMUA_Achr8P18310_001 | Banana | plasma membrane | 52.75 | 62.95 |
| OQU86360 | Sorghum | plasma membrane | 51.65 | 61.24 |
| Os01t0139600-01 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 51.65 | 60.06 |
| Solyc02g086370.2.1 | Tomato | mitochondrion, plasma membrane | 61.54 | 57.88 |
| AT2G01180.3 | Thale cress | plasma membrane | 51.65 | 56.97 |
| PGSC0003DMT400078582 | Potato | mitochondrion | 60.71 | 56.81 |
| TraesCS3A01G052100.2 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.1 | 56.53 |
| Zm00001d008592_P003 | Maize | plasma membrane | 51.65 | 55.62 |
| TraesCS3B01G060600.1 | Wheat | peroxisome | 49.45 | 54.71 |
| AT3G18220.1 | Thale cress | plasma membrane | 43.96 | 51.95 |
| TraesCS3D01G051000.3 | Wheat | plasma membrane | 51.65 | 49.6 |
| HORVU3Hr1G008430.3 | Barley | plastid | 50.82 | 48.81 |
Protein Annotations
| Gene3D:1.20.144.10 | MapMan:5.2.2.1 | EntrezGene:821299 | ProteinID:AAF32467.1 | ProteinID:AEE73834.1 | ProteinID:AEE73835.1 |
| ProteinID:AEE73836.1 | ProteinID:AEE73837.1 | ProteinID:AEE73838.1 | ProteinID:ANM65859.1 | ProteinID:ANM65860.1 | ProteinID:ANM65861.1 |
| ProteinID:ANM65862.1 | ProteinID:ANM65863.1 | ProteinID:ANM65864.1 | ProteinID:ANM65865.1 | ArrayExpress:AT3G02600 | EnsemblPlantsGene:AT3G02600 |
| RefSeq:AT3G02600 | TAIR:AT3G02600 | RefSeq:AT3G02600-TAIR-G | EnsemblPlants:AT3G02600.1 | TAIR:AT3G02600.1 | EMBL:AY084915 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006629 | GO:GO:0006644 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008195 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016311 | GO:GO:0016787 | GO:GO:0031969 | InterPro:LPP1/LPP2/LPP3_plant | Symbol:LPP3 | RefSeq:NP_001078095.1 |
| RefSeq:NP_001078096.1 | RefSeq:NP_001078097.1 | RefSeq:NP_001078098.1 | RefSeq:NP_001319453.1 | RefSeq:NP_001327797.1 | RefSeq:NP_001327798.1 |
| RefSeq:NP_001327799.1 | RefSeq:NP_001327800.1 | RefSeq:NP_001327801.1 | RefSeq:NP_001327802.1 | RefSeq:NP_566177.1 | ProteinID:OAP04004.1 |
| PFAM:PF01569 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10165 | PANTHER:PTHR10165:SF138 |
| InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | UniProt:Q8LFD1 | SMART:SM00014 | SUPFAM:SSF48317 | TMHMM:TMhelix |
| UniParc:UPI00000A1823 | SEG:seg | : | : | : | : |
Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
Coordinates
chr3:+:551184..554697
Molecular Weight (calculated)
40777.3 Da
IEP (calculated)
6.716
GRAVY (calculated)
0.079
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.