Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G052100.2 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 84.43 | 97.26 |
| TraesCS3B01G060600.1 | Wheat | peroxisome | 82.32 | 94.83 |
| OQU86360 | Sorghum | plasma membrane | 68.07 | 84.04 |
| HORVU3Hr1G008430.3 | Barley | plastid | 82.59 | 82.59 |
| Os01t0139600-01 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 63.06 | 76.36 |
| Zm00001d008592_P003 | Maize | plasma membrane | 67.02 | 75.15 |
| VIT_14s0006g02480.t01 | Wine grape | plasma membrane | 37.47 | 70.65 |
| GSMUA_Achr8P18310_001 | Banana | plasma membrane | 51.19 | 63.61 |
| Bra001056.1-P | Field mustard | plasma membrane | 45.91 | 57.81 |
| CDX74243 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 48.55 | 57.32 |
| CDX92005 | Canola | plasma membrane | 48.28 | 57.01 |
| Bra024900.1-P | Field mustard | plasma membrane | 43.54 | 56.7 |
| Bra017464.1-P | Field mustard | plasma membrane | 43.01 | 54.7 |
| CDY17691 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 45.38 | 54.43 |
| KRH35886 | Soybean | plasma membrane | 48.28 | 54.3 |
| Solyc05g008810.2.1 | Tomato | nucleus | 45.91 | 54.04 |
| PGSC0003DMT400078535 | Potato | plasma membrane | 45.91 | 54.04 |
| PGSC0003DMT400078418 | Potato | plasma membrane | 45.38 | 53.42 |
| Solyc05g008820.2.1 | Tomato | plasma membrane | 45.12 | 53.11 |
| KRG90908 | Soybean | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane | 47.76 | 53.08 |
| Bra039179.1-P | Field mustard | endoplasmic reticulum, golgi, peroxisome | 49.08 | 52.54 |
| KRH01709 | Soybean | mitochondrion | 51.72 | 52.41 |
| TraesCS3D01G260400.1 | Wheat | plasma membrane | 40.63 | 52.38 |
| TraesCS7D01G339000.1 | Wheat | plasma membrane | 43.8 | 52.2 |
| AT2G01180.3 | Thale cress | plasma membrane | 45.12 | 51.82 |
| CDY25943 | Canola | plastid | 44.06 | 51.7 |
| CDY43231 | Canola | golgi, peroxisome, plasma membrane | 49.34 | 51.66 |
| AT3G02600.1 | Thale cress | plasma membrane | 49.6 | 51.65 |
| CDY57538 | Canola | golgi, plasma membrane, plastid | 49.08 | 51.38 |
| CDY41071 | Canola | plasma membrane | 44.33 | 51.38 |
| TraesCS5D01G184800.1 | Wheat | plasma membrane | 42.22 | 51.28 |
| Solyc02g086370.2.1 | Tomato | mitochondrion, plasma membrane | 50.92 | 49.87 |
| TraesCS3D01G058900.1 | Wheat | plasma membrane | 42.74 | 49.85 |
| PGSC0003DMT400078582 | Potato | mitochondrion | 50.92 | 49.61 |
| TraesCS3D01G242700.1 | Wheat | plasma membrane | 42.48 | 49.24 |
| TraesCS7D01G066700.2 | Wheat | plasma membrane | 42.48 | 48.2 |
| TraesCS1D01G379800.1 | Wheat | peroxisome | 42.22 | 45.58 |
| CDY57516 | Canola | plasma membrane | 21.64 | 40.8 |
| VIT_01s0011g04170.t01 | Wine grape | plasma membrane | 46.97 | 35.18 |
| VIT_01s0011g04160.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 48.81 | 34.97 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G051000.3 | EnsemblPlantsGene:TraesCS3D01G051000 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF80 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:20013127..20015482
Molecular Weight (calculated)
42096.1 Da
IEP (calculated)
8.433
GRAVY (calculated)
0.114
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGGNTVRP RIQLCYLLCS LRHTTLHCIA CIIVQLCIGS LLYRDCPAGD CACSMSSQNC AQTTEGLGTP VSGQPDRMQQ VQHTVQTHGY GLARKHTYDW
101: VVLILLAAFV VVLHYAPPFN RFVGKDMMTD IRYPVKQSTV PAWAVPVISM LCPVLVFIAL YVARRDVYDL HHAILGVVFA VLITAAFTDV IKNAVGRPRP
201: DFFWRCFPDG RQVYDQVTGG VICHGEKGFL TDGRKSFPSG HTSWSFAGLG FLSLYLSGKI KAFDRKGHVA KLCIVILPLL LASLVGISRI DNYRHHWEDV
301: FVGGLIGYIM AVLCYLHFFP PPYHHQGWGP YAYFHMLEEL EAGNSNNAQN QQSAGQHHIG LTGQHHNGRS RNDLESGSV
101: VVLILLAAFV VVLHYAPPFN RFVGKDMMTD IRYPVKQSTV PAWAVPVISM LCPVLVFIAL YVARRDVYDL HHAILGVVFA VLITAAFTDV IKNAVGRPRP
201: DFFWRCFPDG RQVYDQVTGG VICHGEKGFL TDGRKSFPSG HTSWSFAGLG FLSLYLSGKI KAFDRKGHVA KLCIVILPLL LASLVGISRI DNYRHHWEDV
301: FVGGLIGYIM AVLCYLHFFP PPYHHQGWGP YAYFHMLEEL EAGNSNNAQN QQSAGQHHIG LTGQHHNGRS RNDLESGSV
001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.