Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G180300.1 | Wheat | plasma membrane | 100.0 | 100.0 |
| TraesCS5B01G178200.1 | Wheat | plasma membrane | 99.68 | 97.49 |
| Os09t0308900-01 | Rice | cytosol | 85.9 | 87.3 |
| TraesCS3D01G058900.1 | Wheat | plasma membrane | 87.82 | 84.31 |
| OQU89253 | Sorghum | plasma membrane | 82.05 | 82.85 |
| TraesCS7D01G066700.2 | Wheat | plasma membrane | 88.14 | 82.34 |
| Zm00001d020040_P003 | Maize | plasma membrane | 80.77 | 81.55 |
| HORVU5Hr1G055070.2 | Barley | plastid | 98.4 | 78.72 |
| Zm00001d005579_P003 | Maize | golgi, plasma membrane, plastid | 81.09 | 74.19 |
| GSMUA_Achr5P09970_001 | Banana | plasma membrane | 72.12 | 70.98 |
| GSMUA_Achr1P05420_001 | Banana | cytosol, golgi, plasma membrane | 70.83 | 69.72 |
| TraesCS3D01G260400.1 | Wheat | plasma membrane | 61.22 | 64.97 |
| GSMUA_Achr6P01340_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 70.51 | 61.8 |
| TraesCS7D01G339000.1 | Wheat | plasma membrane | 58.33 | 57.23 |
| TraesCS1D01G379800.1 | Wheat | peroxisome | 62.5 | 55.56 |
| TraesCS3D01G242700.1 | Wheat | plasma membrane | 58.01 | 55.35 |
| TraesCS3D01G051000.3 | Wheat | plasma membrane | 51.28 | 42.22 |
| KRH45276 | Soybean | extracellular | 14.74 | 34.07 |
| CDX94616 | Canola | cytosol, golgi, nucleus | 19.87 | 33.51 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G184800.1 | EnsemblPlantsGene:TraesCS5D01G184800 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF110 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:287015275..287017426
Molecular Weight (calculated)
34706.2 Da
IEP (calculated)
7.354
GRAVY (calculated)
0.199
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MADIQLGCYT IKSHGAKVAR LHMYDWIILL LLAVIDGLLN IIEPFHRFIG KDMMTDLRYP LKGNTVPFWA VPLIGIVLPC VIFGGIYFKK KNIYDLHHGI
101: LGILYSVLIT AVITDAIKDG VGRPRPDFFW RCFPDGKDLY DNVTTGVLCH GEKSVIKEGH KSFPSGHSSW SFAGLGFLTW YLTGKIAVFD RKGHIAKLCI
201: IVLPLLTAAL VAVSRVDDYW HHWQDVVAGA VLGLTVASFC YLQFFPYPYD ADGLWPHAYT LQLAEARNSG IANSFSVRPP TETEEGEGQG GIALRDTSPI
301: LDTMESGRRY GN
101: LGILYSVLIT AVITDAIKDG VGRPRPDFFW RCFPDGKDLY DNVTTGVLCH GEKSVIKEGH KSFPSGHSSW SFAGLGFLTW YLTGKIAVFD RKGHIAKLCI
201: IVLPLLTAAL VAVSRVDDYW HHWQDVVAGA VLGLTVASFC YLQFFPYPYD ADGLWPHAYT LQLAEARNSG IANSFSVRPP TETEEGEGQG GIALRDTSPI
301: LDTMESGRRY GN
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.