Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G373000.1 | Wheat | peroxisome | 97.15 | 97.43 |
TraesCS1B01G393200.1 | Wheat | plasma membrane | 86.32 | 94.98 |
HORVU1Hr1G082900.12 | Barley | peroxisome | 92.31 | 93.1 |
Os05t0549900-00 | Rice | plasma membrane | 49.0 | 70.2 |
TraesCS7D01G339000.1 | Wheat | plasma membrane | 57.83 | 63.84 |
TraesCS3D01G260400.1 | Wheat | plasma membrane | 52.71 | 62.93 |
EER90037 | Sorghum | plasma membrane | 57.55 | 62.54 |
TraesCS5D01G184800.1 | Wheat | plasma membrane | 55.56 | 62.5 |
Zm00001d038908_P004 | Maize | peroxisome | 58.69 | 62.24 |
TraesCS3D01G242700.1 | Wheat | plasma membrane | 55.84 | 59.94 |
TraesCS3D01G058900.1 | Wheat | plasma membrane | 52.71 | 56.92 |
TraesCS7D01G066700.2 | Wheat | plasma membrane | 52.71 | 55.39 |
TraesCS3D01G051000.3 | Wheat | plasma membrane | 45.58 | 42.22 |
Protein Annotations
EnsemblPlants:TraesCS1D01G379800.1 | EnsemblPlantsGene:TraesCS1D01G379800 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
PANTHER:PTHR10165:SF99 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:455765521..455767361
Molecular Weight (calculated)
38843.3 Da
IEP (calculated)
8.340
GRAVY (calculated)
0.058
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNAGSPGDP PGESIESPLL PAPETKMPPP GPGAAAAPIQ LGVPPPYLRT HGAKMARRHM YDWIVLLLLA AIEVVLNLIT PFHRFVAEFM MDDLRYPMKP
101: NTIPVWAVPI YAVILPMLIF AAIYVKKKNA YDLHHAILGL LFSVLITGVL TDAIKDGVGR PRPNFYYRCF PDGVPNYEAV TRQVICHGDA KVIKEGHKSF
201: PSGHTSWSFA GLGFLSWYLA GKIRVFDRGG HIAKLCIVIL PLLFAAMVGV SRVADYWHHW QDVFAGGILG LVVASFCYLQ FFPHPASKHG LWPHAFRHHN
301: PNPETENQGT TDTHQSVPPH DLSMVQYVAS MEMRTNGRAL DNMEAGSGRA W
101: NTIPVWAVPI YAVILPMLIF AAIYVKKKNA YDLHHAILGL LFSVLITGVL TDAIKDGVGR PRPNFYYRCF PDGVPNYEAV TRQVICHGDA KVIKEGHKSF
201: PSGHTSWSFA GLGFLSWYLA GKIRVFDRGG HIAKLCIVIL PLLFAAMVGV SRVADYWHHW QDVFAGGILG LVVASFCYLQ FFPHPASKHG LWPHAFRHHN
301: PNPETENQGT TDTHQSVPPH DLSMVQYVAS MEMRTNGRAL DNMEAGSGRA W
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.