Factsheet for Os05t0549900-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19904	Sorghum	plasma membrane	74.29	55.83
Zm00001d038908_P004	Maize	peroxisome	73.88	54.68
Os01t0666000-01	Rice	plasma membrane	65.31	54.24
TraesCS1B01G393200.1	Wheat	plasma membrane	70.61	54.23
Os01t0693300-01	Rice	plasma membrane	69.8	53.11
Os08t0359200-02	Rice	plasma membrane	66.53	52.58
Os09t0308900-01	Rice	cytosol	65.71	52.44
TraesCS1A01G373000.1	Wheat	peroxisome	70.2	49.14
HORVU1Hr1G082900.12	Barley	peroxisome	69.8	49.14
TraesCS1D01G379800.1	Wheat	peroxisome	70.2	49.0
Os08t0359100-01	Rice	plasma membrane	60.41	47.74
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	55.1	43.13

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	UniProt:A0A0P0WQP5	ProteinID:BAS95204.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008195	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016787	EnsemblPlantsGene:Os05g0549900	EnsemblPlants:Os05t0549900-00	PFAM:PF01569
PANTHER:PTHR10165	PANTHER:PTHR10165:SF99	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317
TMHMM:TMhelix	UniParc:UPI0003939968	SEG:seg	:	:	:

Description

Similar to Lipid phosphate phosphatase 3. (Os05t0549900-00)

Coordinates

chr5:-:27313103..27314293

Molecular Weight (calculated)

27389.8 Da

IEP (calculated)

10.498

GRAVY (calculated)

0.203

Length

245 amino acids

Sequence
(BLAST)

001: MPPPPPATSP APAAIRLGAP HPYLRTHGTK VARLHLLDWI VLALLVAIDA GLNLIEPFHR FVGEDMMISL RYPLKRNTVP IWAVPVRLHL PPFLDFRKKK
101: TVPDSAMFQF WLLFSVLITA VLTDAIKDGV GRPRPNFFWR CFPDGIPKYN NITRGVICHG DKSVIKEGHK SFPSGHTSWS FAGLGFLSWY LAGKIKAFDR
201: GGHVAKLCIV VLPLLIAAMV GVSRVDDYWH HWQDVFTGGI LGRFA

Best Arabidopsis Sequence Match ( AT3G02600.10 )
(BLAST)

001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.