Factsheet for Zm00001d038908_P004

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19904	Sorghum	plasma membrane	88.22	89.57
Os05t0549900-00	Rice	plasma membrane	54.68	73.88
Zm00001d043947_P001	Maize	plasma membrane	48.94	67.5
TraesCS1B01G393200.1	Wheat	plasma membrane	62.24	64.58
Zm00001d020040_P003	Maize	plasma membrane	56.5	60.52
HORVU1Hr1G082900.12	Barley	peroxisome	62.24	59.2
TraesCS1A01G373000.1	Wheat	peroxisome	62.24	58.86
TraesCS1D01G379800.1	Wheat	peroxisome	62.24	58.69
Zm00001d011638_P002	Maize	mitochondrion, plasma membrane	66.16	54.34
Zm00001d005579_P003	Maize	golgi, plasma membrane, plastid	55.89	54.25
Zm00001d032379_P002	Maize	plasma membrane	56.8	49.74
Zm00001d008592_P003	Maize	plasma membrane	48.04	47.04

Protein Annotations

EMBL:BT056071	EnsemblPlants:Zm00001d038908_P004	EnsemblPlants:Zm00001d038908_T004	EnsemblPlantsGene:Zm00001d038908	EntrezGene:100280353	Gene3D:1.20.144.10
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165
PANTHER:PTHR10165:SF99	PFAM:PF01569	ProteinID:AQK88213.1	SEG:seg	SMART:SM00014	SUPFAM:SSF48317
TMHMM:TMhelix	UniParc:UPI00019177DA	UniProt:B8A3C9	MapMan:5.2.2.1	:	:

Description

Lipid phosphate phosphatase 2

Coordinates

chr6:-:166802963..166806016

Molecular Weight (calculated)

36466.1 Da

IEP (calculated)

8.069

GRAVY (calculated)

0.056

Length

331 amino acids

Sequence
(BLAST)

001: MADQPEEMPA APAIRLGPPH PYLKTHGGKV ARLHRLDWAV LLLIAAADVG LNLVEPFHRF VGEDMLADLR YPLKSNTVPV WAVPVYAVIG PIVVFVGLYL
101: KRRNVYDMHH AILGLLFSVL ITGVLTDAIK DGVGRPRPNF FWRCFPDGVP KYDNITRGVL CDGVASVIKE GHKSFPSGHS SWSFAGLGFL SWYLAGKVKA
201: FDRRGHVAKL CVVLLPLLLA AMVAVSRVDD YWHHWQDVFA GGILGLVVAS FCYLQFFPPP SGEQGFWPHA YSEHILNPER EGQAQSTASS NHHRRLSSRG
301: HVAVEMSTAT ASQEASSLGP MEEMEEGRGA R

Best Arabidopsis Sequence Match ( AT1G15080.1 )
(BLAST)

001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR

Arabidopsis Description

LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.