CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038908_P004	Maize	peroxisome	89.57	88.22
Os05t0549900-00	Rice	plasma membrane	55.83	74.29
EER90050	Sorghum	plastid	67.18	68.22
EER90037	Sorghum	plasma membrane	66.56	67.18
KXG24994	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	60.43	63.55
KXG33171	Sorghum	plasma membrane	69.33	62.43
OQU89253	Sorghum	plasma membrane	58.59	61.81
KXG33063	Sorghum	mitochondrion, plastid	66.26	56.25
OQU86360	Sorghum	plasma membrane	50.31	53.42

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	EntrezGene:8061114	UniProt:C5YV08	EnsemblPlants:EES19904	ProteinID:EES19904
ProteinID:EES19904.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0008195	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787
PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF99	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014
EnsemblPlantsGene:SORBI_3009G221500	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0001A891EE	RefSeq:XP_002441474.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:56464843..56469136

Molecular Weight (calculated)

36304.7 Da

IEP (calculated)

6.991

GRAVY (calculated)

0.024

Length

326 amino acids

Sequence
(BLAST)

001: MAEPDQPEEM PPPAAIRLGP PHPYLKTHGG KVARLHGFDW AVLLLLVAAD VGLNLIEPFH RFVGEDMLTD LRYPLKSNTV PVWAVPIYAV IGPIVVFVGV
101: YLKRRNVYDM HHAILGLLFS VLITGVLTDA IKDGVGRPRP NFFWRCFPDG VPKYDNFTRG VLCDGVASVI KEGHKSFPSG HSSWSFAGLG FLSWYLAGKV
201: KVFDRRGHVA KLCVVVLPLL LAAMVAVSRV DDYWHHWQDV FAGGILGLVV ASFCYLQFFP PPSGEQGFWP HAYFEHIHNP ECEGQAHSTT NSNHHRSLST
301: REPVAVEMST TSQEALDSME EGRRDQ

Best Arabidopsis Sequence Match ( AT1G15080.1 )
(BLAST)

001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR

Arabidopsis Description

LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.