Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G379800.1 | Wheat | peroxisome | 97.43 | 97.15 |
| TraesCS1B01G393200.1 | Wheat | plasma membrane | 86.0 | 94.36 |
| HORVU1Hr1G082900.12 | Barley | peroxisome | 92.57 | 93.1 |
| Os05t0549900-00 | Rice | plasma membrane | 49.14 | 70.2 |
| TraesCS7A01G330800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane, plastid | 58.0 | 63.84 |
| TraesCS3A01G260300.1 | Wheat | plasma membrane | 52.86 | 62.93 |
| EER90037 | Sorghum | plasma membrane | 57.71 | 62.54 |
| Zm00001d038908_P004 | Maize | peroxisome | 58.86 | 62.24 |
| TraesCS5A01G180300.1 | Wheat | plasma membrane | 55.14 | 61.86 |
| TraesCS2A01G485500.1 | Wheat | plasma membrane | 53.14 | 57.23 |
| TraesCS4A01G417500.1 | Wheat | plasma membrane | 48.29 | 57.09 |
| TraesCS3A01G242700.1 | Wheat | plasma membrane | 55.14 | 53.91 |
| TraesCS3A01G052100.2 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 45.71 | 48.63 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G373000.1 | EnsemblPlantsGene:TraesCS1A01G373000 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF99 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:549312696..549314670
Molecular Weight (calculated)
38727.2 Da
IEP (calculated)
8.075
GRAVY (calculated)
0.100
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPAGSPGDP PGESIESPLL PAPETKMPPP GPAAAAAIQL GVPPPYLRTH GAKMARRHMY DWIVLLLLAA IEVVLNLITP FHRFVAEFMM DDLRYPMKPN
101: TIPVWAVPIY AVILPMLIFA AIYVKKKNAY DLHHAILGLL FSVLITGVLT DAIKDGVGRP RPNFYYRCFP DGVPNYEAVT RQVICHGDAK IIKEGHKSFP
201: SGHTSWSFAG LGFLSWYLAG KIRVFDRGGH IAKLCIVILP LLFAAMVGVS RVADYWHHWQ DVFAGGILGL VVASFCYLQF FPHPASKHGL WPHAFQHHNP
301: NPETENQGTT DAHQSVLPHD LSVVQYVTSM EMRTNGRALD NMEAGSGRAW
101: TIPVWAVPIY AVILPMLIFA AIYVKKKNAY DLHHAILGLL FSVLITGVLT DAIKDGVGRP RPNFYYRCFP DGVPNYEAVT RQVICHGDAK IIKEGHKSFP
201: SGHTSWSFAG LGFLSWYLAG KIRVFDRGGH IAKLCIVILP LLFAAMVGVS RVADYWHHWQ DVFAGGILGL VVASFCYLQF FPHPASKHGL WPHAFQHHNP
301: NPETENQGTT DAHQSVLPHD LSVVQYVTSM EMRTNGRALD NMEAGSGRAW
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.