Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G242700.1 | Wheat | plasma membrane | 87.43 | 95.72 |
| TraesCS3B01G270800.1 | Wheat | plasma membrane | 83.52 | 94.62 |
| HORVU3Hr1G060600.6 | Barley | plasma membrane | 79.33 | 81.84 |
| Os01t0666000-01 | Rice | plasma membrane | 62.57 | 75.93 |
| Zm00001d043947_P001 | Maize | plasma membrane | 48.6 | 72.5 |
| TraesCS3A01G260300.1 | Wheat | plasma membrane | 50.84 | 61.9 |
| KXG33063 | Sorghum | mitochondrion, plastid | 65.64 | 61.2 |
| TraesCS5A01G180300.1 | Wheat | plasma membrane | 50.28 | 57.69 |
| TraesCS7A01G330800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane, plastid | 50.0 | 56.29 |
| TraesCS1A01G373000.1 | Wheat | peroxisome | 53.91 | 55.14 |
| TraesCS2A01G485500.1 | Wheat | plasma membrane | 48.88 | 53.85 |
| TraesCS4A01G417500.1 | Wheat | plasma membrane | 44.41 | 53.72 |
| TraesCS3A01G052100.2 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 45.53 | 49.54 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G242700.1 | EnsemblPlantsGene:TraesCS3A01G242700 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF99 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:456436072..456441738
Molecular Weight (calculated)
39823.3 Da
IEP (calculated)
9.418
GRAVY (calculated)
0.117
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAPACTNAP ACTFPFATMQ SHGVRIARSH AYDWVALLLL IAMECVLNAI EPFHRFVGEG MIADLRYPLK SNTVPVWAVP IVAVIAPMLI FIAIYIWRRN
101: AYDLHHATIG ILFSVLITGV LTDAIKNAVG RPRPNFFWRC FPDGIAVYDN ITTAVICHGD ASVIKEGHKS FPSGHSSWSF AGLGFLSWYL AGKITVFDRR
201: GHVAKLCVVI LPLLVAAVIA ISRVDDYWHH WQDVFAGGIL GMVIASVCYL QFFPPPSDDK GFWPHAHFRY ISDREEESRR RRTTEMSNSD STAVVPRQGE
301: TGANTSRTLD AMESERVCKR VPAARVGTGT HRRWKSMSNT TTPALLAKLR GTKLREIG
101: AYDLHHATIG ILFSVLITGV LTDAIKNAVG RPRPNFFWRC FPDGIAVYDN ITTAVICHGD ASVIKEGHKS FPSGHSSWSF AGLGFLSWYL AGKITVFDRR
201: GHVAKLCVVI LPLLVAAVIA ISRVDDYWHH WQDVFAGGIL GMVIASVCYL QFFPPPSDDK GFWPHAHFRY ISDREEESRR RRTTEMSNSD STAVVPRQGE
301: TGANTSRTLD AMESERVCKR VPAARVGTGT HRRWKSMSNT TTPALLAKLR GTKLREIG
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.