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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33719 Canola plasma membrane 41.08 24.36
CDX81695 Canola plasma membrane 41.08 24.13
KRH45276 Soybean extracellular 16.22 22.22
GSMUA_Achr1P05420_001 Banana cytosol, golgi, plasma membrane 36.22 21.14
TraesCS4A01G417500.1 Wheat plasma membrane 33.51 20.95
Os08t0359200-02 Rice plasma membrane 34.59 20.65
GSMUA_Achr5P09970_001 Banana plasma membrane 35.14 20.5
KXG24994 Sorghum cytosol, endoplasmic reticulum, plasma membrane 34.05 20.32
Os09t0308900-01 Rice cytosol 33.51 20.2
GSMUA_Achr3P01450_001 Banana plasma membrane 34.59 20.19
TraesCS5D01G184800.1 Wheat plasma membrane 33.51 19.87
TraesCS5A01G180300.1 Wheat plasma membrane 33.51 19.87
OQU89253 Sorghum plasma membrane 32.97 19.74
CDY24441 Canola golgi 32.43 19.67
CDX92215 Canola golgi 32.43 19.67
CDX92005 Canola plasma membrane 34.05 19.63
CDX74243 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 34.05 19.63
TraesCS5B01G178200.1 Wheat plasma membrane 33.51 19.44
Zm00001d020040_P003 Maize plasma membrane 32.43 19.42
TraesCS3D01G058900.1 Wheat plasma membrane 34.05 19.38
TraesCS2A01G485500.1 Wheat plasma membrane 34.05 19.38
CDY17691 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 32.97 19.3
Os08t0359100-01 Rice plasma membrane 31.89 19.03
TraesCS7D01G066700.2 Wheat plasma membrane 34.05 18.86
GSMUA_Achr6P01340_001 Banana endoplasmic reticulum, nucleus, peroxisome 35.68 18.54
CDY41071 Canola plasma membrane 31.35 17.74
CDY57538 Canola golgi, plasma membrane, plastid 34.59 17.68
CDY25943 Canola plastid 30.81 17.65
Zm00001d005579_P003 Maize golgi, plasma membrane, plastid 32.43 17.6
GSMUA_Achr10P... Banana plasma membrane 30.81 17.54
CDY43231 Canola golgi, peroxisome, plasma membrane 34.05 17.4
HORVU7Hr1G014130.1 Barley plastid 33.51 16.85
Zm00001d032379_P002 Maize plasma membrane 33.51 16.4
HORVU5Hr1G055070.2 Barley plastid 34.05 16.15
CDY57516 Canola plasma membrane 16.76 15.42
GSMUA_Achr2P22590_001 Banana cytosol, mitochondrion, plasma membrane, plastid 35.14 6.7
Protein Annotations
EnsemblPlants:CDX94616EnsemblPlantsGene:GSBRNA2T00157931001GO:A0A078DZM9InterPro:LPP1/LPP2/LPP3_plantInterPro:P_Acid_Pase_2/haloperoxi_sfPANTHER:PTHR10165
PANTHER:PTHR10165:SF138ProteinID:CDX94616ProteinID:CDX94616.1SEG:segSUPFAM:SSF48317TMHMM:TMhelix
UniParc:UPI0004EDDB2EMapMan:5.2.2.1::::
Description
BnaC07g10420D
Coordinates
chrLK031883:+:389753..391578
Molecular Weight (calculated)
21130.4 Da
IEP (calculated)
10.128
GRAVY (calculated)
-0.506
Length
185 amino acids
Sequence
(BLAST)
001: MRDRREGRRD ETGIERRQSS DPPYSRSVAA CTFLQNSSRE KRRQKTESSS RITLPSSMET DDSHSHSSPQ ELCLRSQRKS VLKLCCIARC SLLMRCVLVF
101: SGLLFCVLVT GVITDAIKDA VSRPRPGFFW RCFPDGRGFF DNVKKDVLCI GDKDVVKEGH KSFPNPTRLV SFFALDKRYD RVSVK
Best Arabidopsis Sequence Match ( AT1G15080.1 )
(BLAST)
001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR
Arabidopsis Description
LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.