Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- extracellular 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra012567.1-P | |
| Bra012880.1-P | |
| Bra013361.1-P | |
| Bra020580.1-P | |
| Bra036850.1-P |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84893 | Canola | plastid | 100.0 | 100.0 |
| AT5G51010.1 | Thale cress | plastid | 81.53 | 83.12 |
| Zm00001d007394_P001 | Maize | plastid | 54.14 | 57.82 |
| EES09846 | Sorghum | plastid | 55.41 | 57.62 |
| KRH41049 | Soybean | nucleus, plastid | 57.32 | 57.32 |
| KRH59722 | Soybean | nucleus | 56.05 | 57.14 |
| Solyc03g118130.2.1 | Tomato | plastid | 57.32 | 56.96 |
| VIT_17s0000g00110.t01 | Wine grape | plastid | 57.32 | 55.56 |
| Os11t0528500-01 | Rice | plastid | 52.87 | 54.97 |
| TraesCS4B01G100700.1 | Wheat | plastid | 53.5 | 54.9 |
| TraesCS4D01G097300.1 | Wheat | plastid | 52.87 | 54.25 |
| PGSC0003DMT400036930 | Potato | plastid | 54.78 | 53.75 |
| TraesCS4A01G215500.1 | Wheat | plastid | 52.23 | 52.9 |
| KRH63883 | Soybean | plastid | 52.87 | 50.3 |
| GSMUA_Achr10P... | Banana | plastid | 54.14 | 50.3 |
| KRH54078 | Soybean | plastid | 38.22 | 41.67 |
| HORVU4Hr1G043650.2 | Barley | plastid | 52.87 | 32.94 |
| GSMUA_Achr6P16380_001 | Banana | vacuole | 31.21 | 27.84 |
Protein Annotations
| Gene3D:2.20.28.10 | MapMan:35.2 | EnsemblPlantsGene:Bra022748 | EnsemblPlants:Bra022748.1 | EnsemblPlants:Bra022748.1-P | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR024934 |
| UniProt:M4E1U8 | PFscan:PS50903 | PANTHER:PTHR45299 | InterPro:Rubredoxin-like_dom | InterPro:Rubredoxin_dom | SUPFAM:SSF57802 |
| TMHMM:TMhelix | UniParc:UPI0002540169 | SEG:seg | : | : | : |
Description
AT5G51010 (E=1e-057) | rubredoxin family protein
Coordinates
chrA03:-:6805604..6806351
Molecular Weight (calculated)
17533.2 Da
IEP (calculated)
10.292
GRAVY (calculated)
-0.350
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMYVPPAT LYAGKPTPVT SNLQRSSFLP YYSLRILGDK KKKSLSKSSS PSSAPRFSMR VSSKQAYICR DCGYIYNDRT PFDKLPDNYF CPVCAAPKRR
101: FRPYMPDVSK NVNDKDVRKA RKAELQRDEA VGKALPIAIA VGVLALAALY FYVNSTA
101: FRPYMPDVSK NVNDKDVRKA RKAELQRDEA VGKALPIAIA VGVLALAALY FYVNSTA
001: MAMQLPPTTL YAGRSSVVLP PTTPTLQRSS FLPYYSMRLL GNKKSLSKSS APRFSMRVSS KQAYICRDCG YIYNDRTPFD KLPDNYFCPV CAAPKRRFRA
101: YMPDVSKNVN DKDVRKARKA ELQRDEAVGK ALPIGIAVGV LALAALYFYV NSTS
101: YMPDVSKNVN DKDVRKARKA ELQRDEAVGK ALPIGIAVGV LALAALYFYV NSTS
Arabidopsis Description
Rubredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FI47]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.