Factsheet for Bra020580.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
vacuole 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05566	Canola	nucleus	97.21	97.76
AT5G27690.1	Thale cress	nucleus	75.21	76.7
PGSC0003DMT400029504	Potato	nucleus	36.77	42.72
Solyc01g066880.2.1	Tomato	cytosol	36.77	42.04
VIT_14s0060g02090.t01	Wine grape	cytosol	28.69	29.43
GSMUA_Achr11P...	Banana	endoplasmic reticulum	19.5	29.29
GSMUA_Achr5P21400_001	Banana	cytosol	23.68	27.87
KRH33893	Soybean	cytosol	28.97	27.66
Bra027947.1-P	Field mustard	nucleus	27.02	27.48
GSMUA_Achr1P24670_001	Banana	cytosol	21.17	25.94
OQU90456	Sorghum	cytosol	24.79	25.57
TraesCS2D01G115700.1	Wheat	cytosol	24.23	25.29
KRH68524	Soybean	cytosol	24.79	25.28
TraesCS1A01G232800.1	Wheat	cytosol	21.45	25.25
Zm00001d007130_P001	Maize	cytosol	22.28	25.16
TraesCS2A01G114900.1	Wheat	cytosol	23.96	25.15
GSMUA_Achr11P...	Banana	cytosol	22.56	25.08
TraesCS1D01G234000.1	Wheat	cytosol	21.45	24.92
TraesCS2B01G134100.1	Wheat	cytosol	23.68	24.85
Zm00001d022474_P001	Maize	cytosol	22.56	24.62
TraesCS1B01G245900.1	Wheat	cytosol	20.61	24.1
Os07t0671400-01	Rice	cytosol	19.78	23.99
Os01t0933200-00	Rice	cytosol	21.17	22.62
TraesCS3B01G489000.1	Wheat	cytosol	20.89	22.46
TraesCS3A01G452100.1	Wheat	cytosol	20.89	22.46
TraesCS3D01G444600.1	Wheat	cytosol	20.33	22.32
Os05t0368600-01	Rice	cytosol	20.89	22.06
TraesCS7B01G462300.1	Wheat	cytosol	14.48	21.49
TraesCS5A01G030900.2	Wheat	cytosol	20.06	21.36
TraesCS5B01G030300.1	Wheat	cytosol	20.06	20.87
HORVU3Hr1G097770.1	Barley	cytosol	18.66	20.06
Bra028156.1-P	Field mustard	cytosol	13.37	19.92
HORVU4Hr1G046610.1	Barley	cytosol, mitochondrion, nucleus	20.33	19.68
Zm00001d042225_P002	Maize	endoplasmic reticulum, vacuole	20.33	19.26
TraesCS5D01G039100.2	Wheat	plastid	20.33	19.16
HORVU1Hr1G058350.3	Barley	cytosol	16.43	18.91
Zm00001d047492_P001	Maize	cytosol	18.11	18.73
HORVU7Hr1G118340.7	Barley	cytosol, endoplasmic reticulum, plastid	21.45	18.64
Bra024557.1-P	Field mustard	cytosol	18.38	18.49
Bra001184.1-P	Field mustard	cytosol	24.23	18.43
Bra020774.1-P	Field mustard	cytosol	24.79	18.43
GSMUA_Achr8P10080_001	Banana	endoplasmic reticulum	21.45	18.42
KXG34066	Sorghum	cytosol, plastid	20.61	17.83
Bra001140.1-P	Field mustard	cytosol, mitochondrion	23.96	16.48
Os03t0345700-01	Rice	cytosol, nucleus	11.14	16.0
KXG39397	Sorghum	cytosol	18.94	15.96
Bra040643.1-P	Field mustard	cytosol	24.23	15.65
Bra023702.1-P	Field mustard	cytosol	26.18	15.64
Bra039452.1-P	Field mustard	cytosol	24.51	14.52
Zm00001d029126_P001	Maize	nucleus	18.66	14.5
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	26.46	14.33
HORVU2Hr1G019950.2	Barley	plastid	13.65	10.54

Protein Annotations

EnsemblPlants:Bra020580.1	EnsemblPlants:Bra020580.1-P	EnsemblPlantsGene:Bra020580	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF180	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002546AAA	UniProt:M4DVN6	MapMan:35.1	:	:

Description

AT5G27690 (E=2e-093) | heavy-metal-associated domain-containing protein

Coordinates

chrA02:+:24455126..24456368

Molecular Weight (calculated)

39221.3 Da

IEP (calculated)

6.581

GRAVY (calculated)

-1.098

Length

359 amino acids

Sequence
(BLAST)

001: MDLGTQIGAQ IGTEIGTDIK PETCQEDQRH VFQEYQEPLR YTTWVLRVSI HCEGCKRKIK KLLSKIEGVY TTNIDVKQQK VTVVGNVEPE LLIKKIMKAG
101: RHAELWPTSM DNNNNNECNY QQREKKPKKP KNDDEDSSED DEDDGNNNNS GGMMDGGTCI GGPPGGGGDQ VKQVVTFVNG QPQPPSGDGA PKKKKKKKKK
201: KKSSTVVMEG GGGGGGGGPP PQNGGPPETV IYSAPPPDQY HPPHQQQQHM YPTAHSPPRH YQHQTYGPPP PTYYHAQPQT APSYTVSYNT AHGPSQSGPS
301: NGGNDNAASY YAAPPSYYSY EYVDTGYESP PPEFYSYRSQ PCESFEALSE GNPNACGVM

Best Arabidopsis Sequence Match ( AT5G27690.1 )
(BLAST)

001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM

Arabidopsis Description

HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.