Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G114900.1 | Wheat | cytosol | 95.35 | 95.91 |
| TraesCS2B01G134100.1 | Wheat | cytosol | 94.48 | 95.03 |
| Os07t0671400-01 | Rice | cytosol | 60.17 | 69.93 |
| OQU90456 | Sorghum | cytosol | 62.5 | 61.78 |
| Zm00001d022474_P001 | Maize | cytosol | 56.1 | 58.66 |
| Zm00001d007130_P001 | Maize | cytosol | 48.84 | 52.83 |
| TraesCS5D01G039100.2 | Wheat | plastid | 40.7 | 36.75 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 25.29 | 36.4 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 32.27 | 36.39 |
| GSMUA_Achr11P... | Banana | cytosol | 31.98 | 34.06 |
| TraesCS3D01G444600.1 | Wheat | cytosol | 32.27 | 33.95 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 28.78 | 32.04 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 28.49 | 32.03 |
| KRH37116 | Soybean | cytosol | 25.0 | 31.97 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 32.27 | 31.71 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 26.45 | 31.06 |
| PGSC0003DMT400063687 | Potato | cytosol | 32.27 | 29.84 |
| KRH02248 | Soybean | cytosol | 25.0 | 29.15 |
| Solyc01g099600.2.1 | Tomato | cytosol | 31.69 | 29.07 |
| KRH50862 | Soybean | cytosol | 24.42 | 28.57 |
| CDY41724 | Canola | nucleus | 29.07 | 28.33 |
| Bra027947.1-P | Field mustard | nucleus | 29.07 | 28.33 |
| CDY53573 | Canola | nucleus | 28.49 | 28.16 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 34.01 | 27.99 |
| KRH33893 | Soybean | cytosol | 29.07 | 26.6 |
| PGSC0003DMT400029504 | Potato | nucleus | 23.84 | 26.54 |
| Solyc01g066880.2.1 | Tomato | cytosol | 23.84 | 26.11 |
| AT1G56210.1 | Thale cress | nucleus | 27.03 | 25.55 |
| KRH68524 | Soybean | cytosol | 25.87 | 25.28 |
| TraesCS1D01G100200.1 | Wheat | plastid, vacuole | 29.07 | 24.45 |
| CDY05566 | Canola | nucleus | 25.29 | 24.37 |
| Bra020580.1-P | Field mustard | nucleus | 25.29 | 24.23 |
| CDY25027 | Canola | cytosol | 25.29 | 24.1 |
| AT5G27690.1 | Thale cress | nucleus | 23.84 | 23.3 |
| KRH12046 | Soybean | cytosol | 24.13 | 22.99 |
| HORVU2Hr1G019950.2 | Barley | plastid | 29.07 | 21.51 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 22.97 | 19.13 |
| TraesCS5D01G141600.1 | Wheat | cytosol | 28.49 | 18.7 |
| TraesCS4D01G128900.1 | Wheat | cytosol, mitochondrion, nucleus | 26.45 | 15.42 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | SUPFAM:SSF55008 | EnsemblPlantsGene:TraesCS2D01G115700 | EnsemblPlants:TraesCS2D01G115700.1 |
| TIGR:cd00371 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:64157313..64158598
Molecular Weight (calculated)
36500.2 Da
IEP (calculated)
8.647
GRAVY (calculated)
-1.053
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGEAEPLQ YTTTVLRVSI HCEGCKKKVK KVLHSIEGVY KVTIDATQHK VTVTGSVAAD ALVRRLLKSG KHAALWPMPA PAPPATEAKK PEEAPSAGKG
101: GKGAEKVDAK PKKVAAEVEP ESSEKPDKDE GSEKKPEKAG GKKPKDEAKD EAEVPEKKEK GSPEPPAKEA AAADEAPEAG GEETGGKKGK KKKNKQQKEA
201: GDGDAATEKP PPPQQQQQQQ PKTKQPQPQQ AMPPVPAPGP GPGPDRAHGH GGPYPYYAPQ PVMSYNMAQP SASVSYYAPT PVASMQPMPP PPPYGGYSPY
301: PPMMMPPPPP PEYMYGPPGM RSSPPQEPYN SMFNEENPSS CSVM
101: GKGAEKVDAK PKKVAAEVEP ESSEKPDKDE GSEKKPEKAG GKKPKDEAKD EAEVPEKKEK GSPEPPAKEA AAADEAPEAG GEETGGKKGK KKKNKQQKEA
201: GDGDAATEKP PPPQQQQQQQ PKTKQPQPQQ AMPPVPAPGP GPGPDRAHGH GGPYPYYAPQ PVMSYNMAQP SASVSYYAPT PVASMQPMPP PPPYGGYSPY
301: PPMMMPPPPP PEYMYGPPGM RSSPPQEPYN SMFNEENPSS CSVM
001: MATDEMKSET KKTEHKQKQS TQIKQDLPPP TIPPLPLPYK SCTLKVSIHC EGCKRKVKKI LTSIEGVFKV DIDVKQHKVT VIGIISPEIL LKKLNKAGKN
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
Arabidopsis Description
HIPP35Heavy metal-associated isoprenylated plant protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7J6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.