Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G114900.1 | Wheat | cytosol | 96.2 | 96.2 |
| TraesCS2D01G115700.1 | Wheat | cytosol | 95.03 | 94.48 |
| Os07t0671400-01 | Rice | cytosol | 60.23 | 69.59 |
| OQU90456 | Sorghum | cytosol | 63.45 | 62.36 |
| Zm00001d022474_P001 | Maize | cytosol | 56.43 | 58.66 |
| Zm00001d007130_P001 | Maize | cytosol | 49.71 | 53.46 |
| TraesCS7B01G462300.1 | Wheat | cytosol | 29.53 | 41.74 |
| TraesCS5B01G030300.1 | Wheat | cytosol | 39.47 | 39.13 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 31.87 | 35.74 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 24.85 | 35.56 |
| GSMUA_Achr11P... | Banana | cytosol | 31.87 | 33.75 |
| TraesCS1B01G245900.1 | Wheat | cytosol | 29.53 | 32.9 |
| TraesCS3B01G489000.1 | Wheat | cytosol | 31.87 | 32.63 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 32.16 | 31.43 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 26.9 | 31.4 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 28.07 | 31.37 |
| KRH37116 | Soybean | cytosol | 24.27 | 30.86 |
| PGSC0003DMT400063687 | Potato | cytosol | 32.46 | 29.84 |
| Solyc01g099600.2.1 | Tomato | cytosol | 31.58 | 28.8 |
| KRH02248 | Soybean | cytosol | 24.56 | 28.47 |
| CDY41724 | Canola | nucleus | 29.24 | 28.33 |
| Bra027947.1-P | Field mustard | nucleus | 29.24 | 28.33 |
| CDY53573 | Canola | nucleus | 28.66 | 28.16 |
| KRH50862 | Soybean | cytosol | 23.68 | 27.55 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 33.33 | 27.27 |
| KRH33893 | Soybean | cytosol | 28.66 | 26.06 |
| PGSC0003DMT400029504 | Potato | nucleus | 23.39 | 25.89 |
| Solyc01g066880.2.1 | Tomato | cytosol | 23.68 | 25.8 |
| AT1G56210.1 | Thale cress | nucleus | 26.9 | 25.27 |
| TraesCS1B01G119400.1 | Wheat | cytosol, plastid | 29.24 | 24.69 |
| KRH68524 | Soybean | cytosol | 25.15 | 24.43 |
| CDY05566 | Canola | nucleus | 24.85 | 23.81 |
| Bra020580.1-P | Field mustard | nucleus | 24.85 | 23.68 |
| CDY25027 | Canola | cytosol | 24.85 | 23.55 |
| AT5G27690.1 | Thale cress | nucleus | 23.68 | 23.01 |
| KRH12046 | Soybean | cytosol | 23.39 | 22.16 |
| HORVU2Hr1G019950.2 | Barley | plastid | 28.66 | 21.08 |
| TraesCS5B01G131600.1 | Wheat | cytosol | 28.36 | 18.69 |
| TraesCS3B01G034100.1 | Wheat | cytosol | 21.64 | 17.62 |
| TraesCS4B01G134000.1 | Wheat | cytosol, mitochondrion, nucleus | 26.32 | 15.76 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | SUPFAM:SSF55008 | EnsemblPlantsGene:TraesCS2B01G134100 | EnsemblPlants:TraesCS2B01G134100.1 |
| TIGR:cd00371 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:100325769..100327063
Molecular Weight (calculated)
36348.0 Da
IEP (calculated)
8.656
GRAVY (calculated)
-1.045
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGEAEPLQ YTTTVLRVSI HCEGCKKKVK KVLHSIEGVY KVTIDATQHK VTVTGSVAAD ALVRRLLKSG KHAALWPMPP APPATEAKKP EEAPSAGKGG
101: KGAEKVDAKP KKVADEAESE GSEKPAKDEG SEKKPEKAAA KKPKDEAKEE GEVPEKKEKG SPEPPAKEAA VGDEAPEAGG EETGGKKGKK KKNKQQKEAG
201: DGDAATEKPP PPPPQQQQQQ QPKTKQPQPQ QAMPPVPAPG TGPERAHGHG GPFPYYAPQP VMSYNMAQPS ASVSYYAPTP VASMQPMPPP PPYGGYSPYP
301: PMMMPPPPPE YMYGPPGMRS SPPQEPYNSM FNEENPSSCS VM
101: KGAEKVDAKP KKVADEAESE GSEKPAKDEG SEKKPEKAAA KKPKDEAKEE GEVPEKKEKG SPEPPAKEAA VGDEAPEAGG EETGGKKGKK KKNKQQKEAG
201: DGDAATEKPP PPPPQQQQQQ QPKTKQPQPQ QAMPPVPAPG TGPERAHGHG GPFPYYAPQP VMSYNMAQPS ASVSYYAPTP VASMQPMPPP PPYGGYSPYP
301: PMMMPPPPPE YMYGPPGMRS SPPQEPYNSM FNEENPSSCS VM
001: MATDEMKSET KKTEHKQKQS TQIKQDLPPP TIPPLPLPYK SCTLKVSIHC EGCKRKVKKI LTSIEGVFKV DIDVKQHKVT VIGIISPEIL LKKLNKAGKN
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
Arabidopsis Description
HIPP35Heavy metal-associated isoprenylated plant protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7J6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.