Factsheet for TraesCS1B01G119400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G100200.1	Wheat	plastid, vacuole	95.31	94.38
TraesCS1A01G091600.1	Wheat	endoplasmic reticulum, plastid	91.85	93.47
HORVU1Hr1G021620.2	Barley	plastid	84.44	87.47
EES17720	Sorghum	nucleus	56.79	61.99
Zm00001d035783_P001	Maize	nucleus	53.09	60.73
Os05t0150733-00	Rice	cytosol, nucleus, plastid	28.89	60.0
GSMUA_Achr11P...	Banana	cytosol	29.63	48.0
VIT_07s0005g00050.t01	Wine grape	cytosol	25.68	38.81
GSMUA_AchrUn_...	Banana	plastid	19.51	34.65
TraesCS7B01G462300.1	Wheat	cytosol	18.27	30.58
KRG96418	Soybean	cytosol	21.73	29.93
KRH68159	Soybean	cytosol	21.48	29.69
TraesCS2B01G134100.1	Wheat	cytosol	24.69	29.24
TraesCS1B01G245900.1	Wheat	cytosol	21.23	28.01
TraesCS3B01G489000.1	Wheat	cytosol	21.98	26.65
TraesCS5B01G030300.1	Wheat	cytosol	21.73	25.51
TraesCS5B01G131600.1	Wheat	cytosol	24.69	19.27
TraesCS3B01G034100.1	Wheat	cytosol	17.53	16.9
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	23.46	16.64

Protein Annotations

EnsemblPlants:TraesCS1B01G119400.1	EnsemblPlantsGene:TraesCS1B01G119400	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
ncoils:Coil	PANTHER:PTHR22814	PANTHER:PTHR22814:SF75	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	TIGR:cd00371	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1B:+:141721771..141723622

Molecular Weight (calculated)

41098.2 Da

IEP (calculated)

8.605

GRAVY (calculated)

-0.552

Length

405 amino acids

Sequence
(BLAST)

001: MLFSHALSQD QTLPLCSVLP PFCSPYPLVP PFFTPLLTCT NTNKHSHFPV TSLHSPHSTA MASAEEGAQP LMYQTVALKV SIHCEGCKKK VKKVLQTIEG
101: VYKTDIDTQQ HKVVVVGNVS VDALVKKLIK TGKHAEPWPE PLPPPSDANP PASGGGGDGG GGGKKKKKKK NKNKTAEPAA PGAPTAEGAG GSVPPKNHDH
201: TGTCDEASGH EQPHQVEGGG GGGGDPPKNP GAGDPHDGRA GMVAPFAMTP QGMQPMAPSA NASGGGGGGK KKKKGKGGNN GNANANGGDG ATAQMSPHDA
301: PANPAIGNAG QNAPAVVDAG AYPPATAMSY PGYYGSGAGA GHMPPPYAMS YSTSHPHRSS AYYHPMAGAA YTGGAGYYYS TAPVSAAPGS YYMFSEENAN
401: ACSVM

Best Arabidopsis Sequence Match ( AT1G56210.1 )
(BLAST)

001: MATDEMKSET KKTEHKQKQS TQIKQDLPPP TIPPLPLPYK SCTLKVSIHC EGCKRKVKKI LTSIEGVFKV DIDVKQHKVT VIGIISPEIL LKKLNKAGKN
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM

Arabidopsis Description

HIPP35Heavy metal-associated isoprenylated plant protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7J6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.