Factsheet for VIT_07s0005g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02310_001	Banana	cytosol	35.45	36.54
VIT_05s0020g01450.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	41.04	35.95
KRG96418	Soybean	cytosol	37.69	34.35
VIT_14s0060g02090.t01	Wine grape	cytosol	42.91	32.86
KRH68159	Soybean	cytosol	35.82	32.76
GSMUA_Achr11P...	Banana	cytosol	29.48	31.6
GSMUA_Achr9P30980_001	Banana	cytosol	34.33	30.67
Zm00001d035783_P001	Maize	nucleus	39.93	30.23
EES17720	Sorghum	nucleus	39.93	28.84
VIT_14s0006g01780.t01	Wine grape	extracellular	20.15	27.41
GSMUA_AchrUn_...	Banana	plastid	23.13	27.19
TraesCS1A01G091600.1	Wheat	endoplasmic reticulum, plastid	39.55	26.63
HORVU1Hr1G021620.2	Barley	plastid	38.43	26.34
TraesCS1B01G119400.1	Wheat	cytosol, plastid	38.81	25.68
TraesCS1D01G100200.1	Wheat	plastid, vacuole	38.43	25.18
VIT_01s0011g04710.t01	Wine grape	cytosol	27.61	18.97
Os05t0150733-00	Rice	cytosol, nucleus, plastid	12.69	17.44
VIT_14s0128g00190.t01	Wine grape	cytosol	32.09	16.93
VIT_05s0020g02690.t01	Wine grape	cytosol	30.22	16.5

Protein Annotations

EntrezGene:100252094	wikigene:100252094	Gene3D:3.30.70.100	MapMan:35.1	ProteinID:CBI36821	ProteinID:CBI36821.3
UniProt:D7U255	EMBL:FN596502	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	EntrezGene:LOC100252094	wikigene:LOC100252094	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF265	SUPFAM:SSF55008	TIGR:TC67474	UniParc:UPI00015CAA37	ArrayExpress:VIT_07s0005g00050	EnsemblPlantsGene:VIT_07s0005g00050
EnsemblPlants:VIT_07s0005g00050.t01	unigene:Vvi.15545	RefSeq:XP_002266955	RefSeq:XP_002266955.1	RefSeq:XP_010652164.1	SEG:seg

Description

No Description!

Coordinates

chr7:+:2865280..2866720

Molecular Weight (calculated)

28923.3 Da

IEP (calculated)

7.488

GRAVY (calculated)

-1.181

Length

268 amino acids

Sequence
(BLAST)

001: MATSPAQDPP QPLKYQTWVL KVSIHCEGCK KKVKKVLHSI DGVYTTVIDS QQHKVTVTGN VDAETLIKKL VKTGKHADLW PEKPDNKENS PGKSKNKKKQ
101: NDAKDSNKGN GEGDQKNSAD KPENSAKDAK KDDDGAGAKT APSADELQGD EGGESEEVDD KTSSSTGGKK KKKKKGQNNN PTNPNPNSGA PPAESEYPVS
201: SPSPAPPPNP PLPTIYPYPA LYYPPPVYGL NYNTASFPST SSYYYRPATP IDPIEELNDE DNKGCSIM

Best Arabidopsis Sequence Match ( AT5G27690.1 )
(BLAST)

001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM

Arabidopsis Description

HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.