Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0005g00050.t01 | Wine grape | cytosol | 35.95 | 41.04 |
| KRH37116 | Soybean | cytosol | 35.95 | 40.89 |
| KRH02248 | Soybean | cytosol | 37.25 | 38.64 |
| KRH50862 | Soybean | cytosol | 36.93 | 38.44 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 37.25 | 32.57 |
| KRH12046 | Soybean | cytosol | 36.27 | 30.75 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 23.2 | 29.71 |
| TraesCS7B01G462300.1 | Wheat | cytosol | 22.88 | 28.93 |
| TraesCS2A01G114900.1 | Wheat | cytosol | 32.03 | 28.66 |
| TraesCS2D01G115700.1 | Wheat | cytosol | 32.03 | 28.49 |
| GSMUA_Achr11P... | Banana | cytosol | 29.74 | 28.17 |
| TraesCS2B01G134100.1 | Wheat | cytosol | 31.37 | 28.07 |
| Zm00001d007130_P001 | Maize | cytosol | 29.09 | 27.99 |
| OQU90456 | Sorghum | cytosol | 31.7 | 27.87 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 27.78 | 27.87 |
| VIT_14s0006g01780.t01 | Wine grape | extracellular | 17.65 | 27.41 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 26.14 | 27.3 |
| TraesCS1A01G232800.1 | Wheat | cytosol | 27.12 | 27.21 |
| TraesCS1B01G245900.1 | Wheat | cytosol | 26.8 | 26.71 |
| Os07t0671400-01 | Rice | cytosol | 25.82 | 26.69 |
| Zm00001d022474_P001 | Maize | cytosol | 27.78 | 25.84 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 25.82 | 25.57 |
| TraesCS5A01G030900.2 | Wheat | cytosol | 27.45 | 24.93 |
| Zm00001d047492_P001 | Maize | cytosol | 28.1 | 24.78 |
| TraesCS5B01G030300.1 | Wheat | cytosol | 27.78 | 24.64 |
| HORVU4Hr1G046610.1 | Barley | cytosol, mitochondrion, nucleus | 28.76 | 23.72 |
| TraesCS3D01G444600.1 | Wheat | cytosol | 25.16 | 23.55 |
| TraesCS5D01G039100.2 | Wheat | plastid | 29.09 | 23.36 |
| HORVU3Hr1G097770.1 | Barley | cytosol | 25.49 | 23.35 |
| TraesCS3A01G452100.1 | Wheat | cytosol | 25.16 | 23.05 |
| TraesCS3B01G489000.1 | Wheat | cytosol | 25.16 | 23.05 |
| Zm00001d042225_P002 | Maize | endoplasmic reticulum, vacuole | 28.1 | 22.69 |
| Os05t0368600-01 | Rice | cytosol | 24.84 | 22.35 |
| Os01t0933200-00 | Rice | cytosol | 24.51 | 22.32 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 29.41 | 21.53 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 21.24 | 20.83 |
| KXG39397 | Sorghum | cytosol | 28.43 | 20.42 |
| HORVU7Hr1G118340.7 | Barley | cytosol, endoplasmic reticulum, plastid | 27.12 | 20.1 |
| VIT_01s0011g04710.t01 | Wine grape | cytosol | 25.49 | 20.0 |
| KXG34066 | Sorghum | cytosol, plastid | 25.82 | 19.04 |
| Zm00001d029126_P001 | Maize | nucleus | 27.78 | 18.4 |
| VIT_14s0128g00190.t01 | Wine grape | cytosol | 29.09 | 17.52 |
| VIT_05s0020g02690.t01 | Wine grape | cytosol | 27.78 | 17.31 |
| Os03t0345700-01 | Rice | cytosol, nucleus | 12.75 | 15.6 |
| HORVU2Hr1G019950.2 | Barley | plastid | 18.63 | 12.26 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | ProteinID:CCB50321 | ProteinID:CCB50321.1 | UniProt:F6HE69 | EMBL:FN595749 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF265 | SUPFAM:SSF55008 |
| TMHMM:TMhelix | UniParc:UPI0002108D72 | ArrayExpress:VIT_05s0020g01450 | EnsemblPlantsGene:VIT_05s0020g01450 | EnsemblPlants:VIT_05s0020g01450.t01 | SEG:seg |
Description
No Description!
Coordinates
chr5:+:3158704..3159842
Molecular Weight (calculated)
32716.6 Da
IEP (calculated)
9.151
GRAVY (calculated)
-0.641
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTVAVAAA AAEEPSEQPL KYKPHFFFFL SFSHCFTLFV LFFSVFQTWV LKVSIHCQGC KTKVKKVLQS IDGVYTINID QKLHKVTVTG NVDVETLIKK
101: LLKTGKPAEM WPEKPSGKEK KSGKGKNKSK ENDPKSEENC SDGSPPADAV LKLASAQKHG GESSDDQEKE LKNGGKAPEK APASDHPPAV EHKGSESGCG
201: TGKSGGGKKK KKKGQKGNNT QGGPPGSQLS GVPAGTGSPA HNPGTDQVMG TVNLSPTRQE PCPYPPTFFP HPVYVASYST AHPSISPYPY TFEIFSDENP
301: NSCSII
101: LLKTGKPAEM WPEKPSGKEK KSGKGKNKSK ENDPKSEENC SDGSPPADAV LKLASAQKHG GESSDDQEKE LKNGGKAPEK APASDHPPAV EHKGSESGCG
201: TGKSGGGKKK KKKGQKGNNT QGGPPGSQLS GVPAGTGSPA HNPGTDQVMG TVNLSPTRQE PCPYPPTFFP HPVYVASYST AHPSISPYPY TFEIFSDENP
301: NSCSII
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Arabidopsis Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.