Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G245900.1 | Wheat | cytosol | 91.48 | 90.88 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 89.84 | 88.67 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 63.93 | 62.5 |
| Os05t0368600-01 | Rice | cytosol | 56.39 | 50.59 |
| TraesCS3A01G452100.1 | Wheat | cytosol | 41.97 | 38.32 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 24.59 | 31.38 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 30.49 | 30.49 |
| TraesCS2A01G114900.1 | Wheat | cytosol | 32.79 | 29.24 |
| KRH37116 | Soybean | cytosol | 24.92 | 28.25 |
| GSMUA_Achr11P... | Banana | cytosol | 29.84 | 28.17 |
| TraesCS5A01G030900.2 | Wheat | cytosol | 30.16 | 27.3 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 27.21 | 27.12 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 30.82 | 26.86 |
| PGSC0003DMT400063687 | Potato | cytosol | 31.8 | 26.08 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 24.92 | 25.94 |
| Solyc01g099600.2.1 | Tomato | cytosol | 31.48 | 25.6 |
| CDY41724 | Canola | nucleus | 28.85 | 24.93 |
| PGSC0003DMT400029504 | Potato | nucleus | 25.25 | 24.92 |
| Solyc01g066880.2.1 | Tomato | cytosol | 25.57 | 24.84 |
| CDY53573 | Canola | nucleus | 28.2 | 24.71 |
| Bra027947.1-P | Field mustard | nucleus | 28.52 | 24.65 |
| KRH68524 | Soybean | cytosol | 27.87 | 24.15 |
| KRH33893 | Soybean | cytosol | 29.51 | 23.94 |
| AT1G56210.1 | Thale cress | nucleus | 27.54 | 23.08 |
| KRH02248 | Soybean | cytosol | 21.97 | 22.71 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 30.82 | 22.49 |
| KRH50862 | Soybean | cytosol | 21.64 | 22.45 |
| Bra020580.1-P | Field mustard | nucleus | 25.25 | 21.45 |
| TraesCS1A01G091600.1 | Wheat | endoplasmic reticulum, plastid | 27.87 | 21.36 |
| AT5G27690.1 | Thale cress | nucleus | 24.59 | 21.31 |
| CDY05566 | Canola | nucleus | 24.92 | 21.29 |
| CDY25027 | Canola | cytosol | 24.92 | 21.05 |
| KRH12046 | Soybean | cytosol | 24.26 | 20.5 |
| TraesCS5A01G133900.1 | Wheat | cytosol | 26.23 | 15.36 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 20.0 | 14.66 |
| TraesCS4A01G184700.1 | Wheat | cytosol, mitochondrion, nucleus | 23.93 | 12.92 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G232800.1 | EnsemblPlantsGene:TraesCS1A01G232800 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:406175092..406176234
Molecular Weight (calculated)
32468.6 Da
IEP (calculated)
7.415
GRAVY (calculated)
-0.739
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEPLQCKT LVLRVSIHCE GCKKKVKKVL QSVDGVYRCD IDARSNKVTV AVTGNVSADA LLKRLRRSGK NAQQWPEQQL AVGTQRPGET KNDSIQPDKP
101: GGTGTAHKPA SGDAETSAAG QSNSKATPEE DPNKVARETV RPAQDDTEST NADAGGVDDV SHRSKEPTAE QCNGPQRKRK QLRPEEEKPV DAIATVVVAA
201: ASDQGSHTCH SPPHLQPPPP PPSVHVLSYS MARPSASAAY YAAAPATAAP DARSLPPQEL PYTYPPCCYY SQPSPWAPQT GAASPARYSY ADLFSDDNAN
301: SCTVM
101: GGTGTAHKPA SGDAETSAAG QSNSKATPEE DPNKVARETV RPAQDDTEST NADAGGVDDV SHRSKEPTAE QCNGPQRKRK QLRPEEEKPV DAIATVVVAA
201: ASDQGSHTCH SPPHLQPPPP PPSVHVLSYS MARPSASAAY YAAAPATAAP DARSLPPQEL PYTYPPCCYY SQPSPWAPQT GAASPARYSY ADLFSDDNAN
301: SCTVM
001: MATDEMKSET KKTEHKQKQS TQIKQDLPPP TIPPLPLPYK SCTLKVSIHC EGCKRKVKKI LTSIEGVFKV DIDVKQHKVT VIGIISPEIL LKKLNKAGKN
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
Arabidopsis Description
HIPP35Heavy metal-associated isoprenylated plant protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7J6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.