Factsheet for TraesCS1A01G091600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 4
cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G100200.1	Wheat	plastid, vacuole	95.48	92.91
TraesCS1B01G119400.1	Wheat	cytosol, plastid	93.47	91.85
HORVU1Hr1G021620.2	Barley	plastid	83.42	84.91
EES17720	Sorghum	nucleus	57.79	61.99
Zm00001d035783_P001	Maize	nucleus	54.27	61.02
Os05t0150733-00	Rice	cytosol, nucleus, plastid	29.65	60.51
GSMUA_Achr11P...	Banana	cytosol	30.9	49.2
VIT_07s0005g00050.t01	Wine grape	cytosol	26.63	39.55
GSMUA_AchrUn_...	Banana	plastid	19.6	34.21
KRG96418	Soybean	cytosol	22.61	30.61
KRH68159	Soybean	cytosol	22.36	30.38
TraesCS2A01G114900.1	Wheat	cytosol	24.87	28.95
TraesCS1A01G232800.1	Wheat	cytosol	21.36	27.87
TraesCS5A01G030900.2	Wheat	cytosol	22.11	26.11
TraesCS3A01G452100.1	Wheat	cytosol	21.36	25.45
TraesCS5A01G133900.1	Wheat	cytosol	25.13	19.19
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	23.62	16.64
TraesCS3A01G048000.1	Wheat	cytosol	17.34	16.59

Protein Annotations

EnsemblPlants:TraesCS1A01G091600.1	EnsemblPlantsGene:TraesCS1A01G091600	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF180	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:84022445..84024205

Molecular Weight (calculated)

40531.7 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.516

Length

398 amino acids

Sequence
(BLAST)

001: MLFSHALPQD QTLPLCSVLP PFCSPCLLVP PFFTPLLTCT NTDKHSHFPV TSLRSPHSPA MAAAEEGAQP LMYQTVALKV SIHCEGCKKK VKKVLHAIEG
101: VYKTDIDTQQ HKVVIVGNVS VDALVKKLIK TGKHAEPWPE PLPPPSDANP PASGGGGGGK KKKKKKNKNK TAEPAAPGAP TAEGAGGSVP PENHDHAGTC
201: DEASGDEQPH QVEGGDPPKN PGAGDPHDGR AGMVAPFAMT PQGMQPMGPS ANASGGGGGG KKKKKGKGGN NGNVNANGGG GAGAAAQISP QDAPANPATG
301: NASQNPPAVV DAGPYPPATA MSYPGYYGSG AGAGHMPPPY AMSYSTSHPH RSSAYYHPMA GAAYTGGAGY YYSTAPVSAA PGSYYMFSEE NANACSVM

Best Arabidopsis Sequence Match ( AT5G27690.1 )
(BLAST)

001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM

Arabidopsis Description

HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.