Factsheet for TraesCS5A01G133900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G141600.1	Wheat	cytosol	97.12	96.56
TraesCS5B01G131600.1	Wheat	cytosol	95.59	95.95
HORVU5Hr1G040920.2	Barley	cytosol	84.84	93.25
Os11t0147500-01	Rice	cytosol	78.69	79.61
Os12t0144600-01	Rice	cytosol	79.65	79.2
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	68.33	63.01
CDY05148	Canola	cytosol	4.41	51.11
GSMUA_Achr11P...	Banana	cytosol	35.32	49.07
GSMUA_Achr8P08580_001	Banana	cytosol	34.93	47.4
GSMUA_Achr8P00380_001	Banana	cytosol	37.24	47.32
GSMUA_Achr11P...	Banana	cytosol, extracellular	21.31	46.06
KRH11382	Soybean	cytosol	42.61	45.12
KRH20903	Soybean	cytosol	42.23	43.74
Solyc01g080070.2.1	Tomato	cytosol	35.51	43.53
GSMUA_Achr8P00190_001	Banana	cytosol	21.69	42.8
AT3G06130.1	Thale cress	cytosol	38.58	42.49
VIT_05s0020g02690.t01	Wine grape	cytosol	39.92	42.36
Solyc01g098760.2.1	Tomato	cytosol	33.97	41.45
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	31.86	41.09
KRH51031	Soybean	cytosol	38.58	41.02
Bra020774.1-P	Field mustard	cytosol	37.81	40.79
CDY13960	Canola	cytosol	38.2	40.2
KRH02117	Soybean	cytosol	38.39	40.08
PGSC0003DMT400073578	Potato	cytosol	33.4	39.91
GSMUA_Achr10P...	Banana	cytosol	31.86	39.62
OQU79299	Sorghum	cytosol	29.56	39.39
CDY71877	Canola	cytosol	31.29	37.82
VIT_14s0128g00190.t01	Wine grape	cytosol	36.85	37.8
PGSC0003DMT400083194	Potato	cytosol	39.73	36.64
AT5G19090.1	Thale cress	cytosol	41.27	36.63
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	29.56	36.58
CDY47193	Canola	cytosol	33.01	36.21
CDY58340	Canola	cytosol	31.86	36.17
Bra001184.1-P	Field mustard	cytosol	32.25	35.59
Bra023702.1-P	Field mustard	cytosol	40.69	35.27
CDY05234	Canola	nucleus	16.7	34.94
CDY66563	Canola	cytosol	28.79	34.8
Bra040643.1-P	Field mustard	cytosol	37.04	34.71
KRG96856	Soybean	cytosol	30.13	34.43
CDY40701	Canola	cytosol	28.6	34.41
CDY71358	Canola	nucleus	15.74	34.31
CDY27785	Canola	cytosol	36.47	34.11
CDY18788	Canola	cytosol	34.55	34.09
KRG92825	Soybean	cytosol	34.36	33.77
CDY18766	Canola	cytosol	36.47	33.75
CDX92558	Canola	cytosol	35.7	33.33
KRH33969	Soybean	cytosol	35.51	33.04
Bra001140.1-P	Field mustard	cytosol, mitochondrion	33.01	32.95
KRH68586	Soybean	cytosol	29.56	32.91
AT3G05220.1	Thale cress	cytosol	36.08	32.58
Bra039452.1-P	Field mustard	cytosol	37.81	32.51
CDY05147	Canola	cytosol	29.75	31.63
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	39.54	31.07
CDY24716	Canola	cytosol	16.7	30.85
TraesCS3A01G048000.1	Wheat	cytosol	23.03	28.85
TraesCS2A01G114900.1	Wheat	cytosol	18.81	28.66
TraesCS5A01G030900.2	Wheat	cytosol	17.08	26.41
TraesCS1A01G232800.1	Wheat	cytosol	15.36	26.23
TraesCS1A01G091600.1	Wheat	endoplasmic reticulum, plastid	19.19	25.13
TraesCS3A01G452100.1	Wheat	cytosol	14.97	23.35
GSMUA_Achr11P...	Banana	endoplasmic reticulum	13.44	21.15

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF175	SUPFAM:SSF55008	EnsemblPlantsGene:TraesCS5A01G133900	EnsemblPlants:TraesCS5A01G133900.1
TIGR:cd00371	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:300963723..300965616

Molecular Weight (calculated)

52955.3 Da

IEP (calculated)

7.448

GRAVY (calculated)

-0.788

Length

521 amino acids

Sequence
(BLAST)

001: MSKEEVLKIQ TCVLKVNIHC DGCQKKVKKI LHKIEGVYQS SIDPEQGKVT VSGMVDPDTI IKKLTKAGKP AELWGSKAGM ANQFQKLQLD GGGKGQAKDA
101: GGKGQSKDAG GAKGQKGGGG GGGAGGASKD AKMMMPPPTA QQLQQLQQQM QMKGMKLPQF MDGKMPFAAA APMKDPKSVK FNLPPEDEFG DDGSEFDDEF
201: DDFDDEDDFD DDGLDDDYFD DPKMMMKPMA MPPNAGGGDK KGGNNGGKKG GNEIPVQIKG NPNNGGGGGG GGSKKDAGGK QNQGGGGGNG NGGGKNGGGG
301: QANNAKGGGG GAPGGGGQPG QPGKKGGGGG PGLGVVGPMG GIGMPPQQQA MMRPNMMGAA GFPGGMGPMG GPMGHHPHMG GAQGGGGVAH GMPAGGMPPP
401: GFFQGGAGGG MPSGPAEMMQ AAGNPMAQQQ YMAMMQHQQQ MMMQQQQQQQ QAAMLNAHAH PHPHHGGGGA PAGYPAMPMG YGYGRPPMPY PMAYPMPMQP
501: HPHADPYNYF SDENPNSCSV M

Best Arabidopsis Sequence Match ( AT3G06130.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKGNGGG GPMAGGVSGG FRPMGGGGPQ NMSMPMGGQM GMGGPMGNMP AVQGLPATGP GGAPQGYFQG AGIDPMQMQQ QQQQQQYLAA
401: VMNQQRAMGN ERFQPMMYAR PPPAVNYMPP NPHQYPNPHP YPYPYPYPYP PPYGNDQYSH AFSDENTSSC DIM

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.