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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g098760.2.1 Tomato cytosol 91.51 93.44
CDY05148 Canola cytosol 7.57 73.33
CDY40701 Canola cytosol 43.58 43.88
CDY66563 Canola cytosol 43.12 43.62
CDY27785 Canola cytosol 52.75 41.29
AT3G05220.1 Thale cress cytosol 54.13 40.9
Bra001140.1-P Field mustard cytosol, mitochondrion 48.62 40.61
Bra040643.1-P Field mustard cytosol 51.61 40.47
CDY18788 Canola cytosol 48.62 40.15
CDY18766 Canola cytosol 51.83 40.14
GSMUA_Achr8P00190_001 Banana cytosol 23.62 39.02
Bra039452.1-P Field mustard cytosol 54.13 38.94
VIT_14s0128g00190.t01 Wine grape cytosol 44.04 37.8
CDY05147 Canola cytosol 42.2 37.55
GSMUA_Achr11P... Banana cytosol, extracellular 19.95 36.1
GSMUA_Achr8P00380_001 Banana cytosol 33.72 35.85
GSMUA_Achr11P... Banana cytosol 30.28 35.2
Zm00001d017393_P001 Maize plastid 13.3 34.52
GSMUA_Achr8P08580_001 Banana cytosol 30.05 34.11
KRG96856 Soybean cytosol 35.55 33.99
PGSC0003DMT400083194 Potato cytosol 44.04 33.98
GSMUA_Achr3P09060_001 Banana cytosol, mitochondrion, nucleus 31.42 33.91
GSMUA_Achr10P... Banana cytosol 32.57 33.89
TraesCS5D01G141600.1 Wheat cytosol 40.37 33.59
Os11t0147500-01 Rice cytosol 39.45 33.4
TraesCS5A01G133900.1 Wheat cytosol 39.91 33.4
Os12t0144600-01 Rice cytosol 40.14 33.4
GSMUA_Achr8P21830_001 Banana endoplasmic reticulum 32.11 33.25
TraesCS5B01G131600.1 Wheat cytosol 39.45 33.14
HORVU5Hr1G040920.2 Barley cytosol 34.17 31.43
KRH68586 Soybean cytosol 33.49 31.2
KRG92825 Soybean cytosol 37.84 31.13
EES04840 Sorghum cytosol 34.63 30.88
KRH33969 Soybean cytosol 39.45 30.71
Zm00001d053438_P002 Maize cytosol 33.95 30.2
Zm00001d016149_P001 Maize cytosol 32.34 29.94
EES15655 Sorghum cytosol 37.16 28.72
Zm00001d023372_P001 Maize cytosol 36.24 28.68
TraesCS4B01G134000.1 Wheat cytosol, mitochondrion, nucleus 36.47 27.85
TraesCS4A01G184700.1 Wheat cytosol, mitochondrion, nucleus 35.55 27.43
Zm00001d004931_P001 Maize cytosol, nucleus, plasma membrane 33.49 27.29
TraesCS4D01G128900.1 Wheat cytosol, mitochondrion, nucleus 36.47 26.95
PGSC0003DMT400078487 Potato cytosol 24.54 25.85
OQU79299 Sorghum cytosol 23.17 25.83
HORVU4Hr1G025770.8 Barley endoplasmic reticulum 35.78 25.83
PGSC0003DMT400029504 Potato nucleus 17.89 25.24
PGSC0003DMT400063687 Potato cytosol 20.18 23.66
OQU82864 Sorghum cytosol 24.77 22.93
EES07966 Sorghum cytosol, nucleus, peroxisome 26.15 22.71
PGSC0003DMT400078636 Potato cytosol 17.89 21.91
KXG27723 Sorghum nucleus 29.59 21.68
GSMUA_Achr11P... Banana endoplasmic reticulum 15.37 20.24
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0009506GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121UniProt:M1CSA0PFAM:PF00403EnsemblPlantsGene:PGSC0003DMG400028581PGSC:PGSC0003DMG400028581EnsemblPlants:PGSC0003DMT400073578
PFscan:PS50846PANTHER:PTHR22814PANTHER:PTHR22814:SF134SUPFAM:SSF55008UniParc:UPI00029586A7SEG:seg
Description
Chloroplast-targeted copper chaperone [Source:PGSC_GENE;Acc:PGSC0003DMG400028581]
Coordinates
chr1:+:76432065..76434200
Molecular Weight (calculated)
46119.6 Da
IEP (calculated)
8.785
GRAVY (calculated)
-0.958
Length
436 amino acids
Sequence
(BLAST)
001: MLKSQTCVLK VNIHCDGCKQ KVKKKLQKIE GVYTVKIDSD QSKVTVTGNV DSATLIKKLV KSGKHAELWG GAQKGGSNFS MMNNQFMNMQ MDNFKGGKDN
101: KAQKGGGGGN KEPPKGNAQQ FLQMMQNLKG SKDNFKMANV PNPKDQKSVK FNLPEDEFDD ESDDFDDESD DYDDESDDEF GGPPPSKMMP AMGGGGGHGA
201: HGLNAMMMKG GPMGNNGGNG KKGGVEIPVQ MAGNHHDGGK NNNNGGKQGK GGNQNQNQNQ NVGKNGGKGN NNGSFGAAAP QKGAGGGKMD GGLLMNSMQQ
301: GGPHGMMSMG QKSGGPMTMG PMGNHPMGHM SAAQGLPAGG PAGYPGMGQG GNNPYSQQQQ QLQQQQYMAQ MMMNQQRPAG YDMYGAHPNM YGAHPMMYAR
401: QHPSVSYGPP PPMGAPVHDN FTHMFSDENT GSCSIM
Best Arabidopsis Sequence Match ( AT3G06130.1 )
(BLAST)
001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKGNGGG GPMAGGVSGG FRPMGGGGPQ NMSMPMGGQM GMGGPMGNMP AVQGLPATGP GGAPQGYFQG AGIDPMQMQQ QQQQQQYLAA
401: VMNQQRAMGN ERFQPMMYAR PPPAVNYMPP NPHQYPNPHP YPYPYPYPYP PPYGNDQYSH AFSDENTSSC DIM
Arabidopsis Description
HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.