Factsheet for PGSC0003DMT400078636

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g091310.1.1	Tomato	cytosol	91.85	91.85
VIT_14s0006g01780.t01	Wine grape	extracellular	17.7	31.98
CDY01696	Canola	cytosol	16.29	24.17
CDX74552	Canola	cytosol	15.45	23.31
Bra028156.1-P	Field mustard	cytosol	15.73	23.24
GSMUA_Achr1P23080_001	Banana	cytosol	19.66	21.81
GSMUA_Achr3P01290_001	Banana	cytosol	21.63	20.75
AT5G37860.1	Thale cress	nucleus	15.17	20.61
GSMUA_Achr8P31620_001	Banana	cytosol	21.63	20.32
GSMUA_Achr7P12020_001	Banana	cytosol	19.94	20.29
Os01t0125600-01	Rice	cytosol	23.6	20.0
GSMUA_Achr2P22760_001	Banana	cytosol	19.38	19.66
GSMUA_Achr10P...	Banana	cytosol	19.1	19.54
PGSC0003DMT400078487	Potato	cytosol	22.19	19.08
GSMUA_Achr9P19310_001	Banana	cytosol	20.79	19.02
TraesCS3D01G031400.1	Wheat	cytosol	21.91	18.89
PGSC0003DMT400029504	Potato	nucleus	16.01	18.45
EES02570	Sorghum	cytosol	22.75	18.12
PGSC0003DMT400073578	Potato	cytosol	21.91	17.89
TraesCS3B01G034100.1	Wheat	cytosol	21.07	17.86
TraesCS3A01G048000.1	Wheat	cytosol	20.79	17.79
Zm00001d008515_P001	Maize	cytosol	22.19	17.06
Zm00001d040040_P001	Maize	cytosol	21.91	16.88
PGSC0003DMT400083194	Potato	cytosol	25.84	16.28
PGSC0003DMT400063687	Potato	cytosol	16.57	15.86
HORVU3Hr1G004420.1	Barley	nucleus	15.73	13.08

Protein Annotations

EnsemblPlants:PGSC0003DMT400078636	EnsemblPlantsGene:PGSC0003DMG400030602	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	PFAM:PF00403	PFscan:PS50846	PGSC:PGSC0003DMG400030602	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002958E21	UniProt:M1D0G9	MapMan:35.1	:	:

Description

Chloroplast-targeted copper chaperone [Source:PGSC_GENE;Acc:PGSC0003DMG400030602]

Coordinates

chr2:+:41765491..41766852

Molecular Weight (calculated)

40769.6 Da

IEP (calculated)

6.124

GRAVY (calculated)

-0.769

Length

356 amino acids

Sequence
(BLAST)

001: MSATVQDFEL VRIQTCVLKV QINCHGCLQK VKKLLKRIEG VYQVKMDVDE QVVIISGNVD SATLIKKLNK SGKHAELLSE NPMENQETEL LYNWLNDDFH
101: QNQGGLSWCD DEKTQNRELL DWLNNTKHQN QMHSLYNSLG ASKRRPMCAP TERGFDHWGN KQFLDQSIGN DSLSGEANRN LFALGNMDYP YNVQEESIIN
201: NADFGRTSAF GYLQSLQGRR NSMVDFQGLR DSNPSFYPNQ GLRSINSCFA NLGSEEPGLQ NLHTAQGEYG YQPRPFSEMN DMQAFHYKHP SSTMNSFFDY
301: PPTMMNSYRQ NSHDNGIGNI INDIYTYQPG RILNQTPYGV FPPNISHSWN MNNYNN

Best Arabidopsis Sequence Match ( AT1G23000.1 )
(BLAST)

001: MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.