Factsheet for PGSC0003DMT400083194

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080070.2.1	Tomato	cytosol	71.5	95.06
VIT_05s0020g02690.t01	Wine grape	cytosol	52.74	60.69
KRH11382	Soybean	cytosol	50.8	58.33
KRH51031	Soybean	cytosol	49.03	56.53
KRH20903	Soybean	cytosol	50.27	56.46
KRH02117	Soybean	cytosol	48.85	55.31
GSMUA_Achr8P00190_001	Banana	cytosol	24.25	51.89
AT3G06130.1	Thale cress	cytosol	42.65	50.95
Bra020774.1-P	Field mustard	cytosol	43.01	50.31
CDY13960	Canola	cytosol	44.07	50.3
CDY71358	Canola	nucleus	20.53	48.54
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	34.51	48.27
CDY71877	Canola	cytosol	36.64	48.03
CDY05234	Canola	nucleus	20.89	47.39
CDY47193	Canola	cytosol	39.65	47.16
CDY58340	Canola	cytosol	37.52	46.19
AT5G19090.1	Thale cress	cytosol	47.79	46.0
GSMUA_Achr10P...	Banana	cytosol	33.63	45.35
Bra023702.1-P	Field mustard	cytosol	47.61	44.76
Bra001184.1-P	Field mustard	cytosol	37.35	44.7
CDX92558	Canola	cytosol	43.72	44.27
PGSC0003DMT400073578	Potato	cytosol	33.98	44.04
GSMUA_Achr8P08580_001	Banana	cytosol	29.56	43.49
GSMUA_Achr11P...	Banana	cytosol, extracellular	18.41	43.15
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	31.86	42.76
GSMUA_Achr8P00380_001	Banana	cytosol	30.44	41.95
Os11t0147500-01	Rice	cytosol	36.46	40.0
TraesCS5D01G141600.1	Wheat	cytosol	36.99	39.89
TraesCS5A01G133900.1	Wheat	cytosol	36.64	39.73
Os12t0144600-01	Rice	cytosol	36.64	39.5
TraesCS5B01G131600.1	Wheat	cytosol	36.28	39.5
GSMUA_Achr11P...	Banana	cytosol	26.02	39.2
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	45.84	39.06
Zm00001d017393_P001	Maize	plastid	11.5	38.69
CDY24716	Canola	cytosol	18.58	37.23
HORVU5Hr1G040920.2	Barley	cytosol	30.97	36.92
EES04840	Sorghum	cytosol	31.5	36.4
Zm00001d016149_P001	Maize	cytosol	30.09	36.09
Zm00001d053438_P002	Maize	cytosol	30.97	35.71
EES15655	Sorghum	cytosol	35.4	35.46
Zm00001d023372_P001	Maize	cytosol	33.1	33.94
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	32.39	32.05
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	31.86	31.86
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	32.74	31.36
OQU79299	Sorghum	cytosol	21.59	31.2
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	29.38	31.03
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	31.5	29.47
OQU82864	Sorghum	cytosol	23.89	28.66
PGSC0003DMT400078487	Potato	cytosol	20.35	27.78
KXG27723	Sorghum	nucleus	28.67	27.23
PGSC0003DMT400029504	Potato	nucleus	14.16	25.89
PGSC0003DMT400078636	Potato	cytosol	16.28	25.84
PGSC0003DMT400063687	Potato	cytosol	16.64	25.27
EES07966	Sorghum	cytosol, nucleus, peroxisome	22.12	24.9
GSMUA_Achr11P...	Banana	endoplasmic reticulum	11.33	19.34

Protein Annotations

EntrezGene:102597464	Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
UniProt:M1D6P1	PFAM:PF00403	EnsemblPlantsGene:PGSC0003DMG400033112	PGSC:PGSC0003DMG400033112	EnsemblPlants:PGSC0003DMT400083194	PFscan:PS50846
PANTHER:PTHR22814	PANTHER:PTHR22814:SF278	SUPFAM:SSF55008	UniParc:UPI000295575D	RefSeq:XP_006339402.1	SEG:seg

Description

Heavy-metal-associated domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400033112]

Coordinates

chr1:+:61538313..61541184

Molecular Weight (calculated)

57894.0 Da

IEP (calculated)

8.753

GRAVY (calculated)

-0.854

Length

565 amino acids

Sequence
(BLAST)

001: MSKEEFLKIQ TCVLKVNIHC DGCKHKVKKI LQKIEGVYKT NIDSEQGKVT VSGNVDPATL IKKLAKSGKH AEVWGAPKAV NNQQNQLNNG KGGNNKGQGQ
101: VQVQVQKGGN NQPKGGGGGG GGGGGAQMPN QQQLQQLKTL QDLKLPPQFK DLKLPPMGKD QNPKAVKFTM PEMDDLTDDE FDEDDLTDYE DDEFDEDELD
201: DELDDIPSKM KAMMGPGAGA NSSGAQMKLP MMSGNPGAQM KPPMMGGNPG AQMKPMMGGN GGGGQMPNMM MMNGLMNGQH PQLMKGGNGG NNGGNNGGGG
301: NGKKGGGNVP VQINMGGNNG GKKGGGNGGN PNQGGGPAQK GGKNGGGQPS GGGGNGGGQN KNGSGGGGGG AGNIPNMNGN GAKKGGGGND GMPQGMPNRM
401: MAMSGGGNMG QLGNMPNPMG QMGQMGGLPV GQMGGLPMGQ MGNPVGQMSH VSAVQGLPAG AAMGGGGGGN AGGYFQGAGP EVMAGNPYYQ QQQMAAMMMQ
501: QQQQQQRANG NERFQPMMYA RPPPAVNYMP PPAPYNPYYY GHPPPPSDNY STFFSDENTN SCTVM

Best Arabidopsis Sequence Match ( AT3G06130.2 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKATTTA IFSGGYEPAT SYGERTVPTN DVRKATTGS

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.