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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13960 Canola cytosol 73.42 87.07
CDY47193 Canola cytosol 69.34 85.68
Bra023702.1-P Field mustard cytosol 84.16 82.2
AT3G06130.1 Thale cress cytosol 62.69 77.8
CDX92558 Canola cytosol 73.76 77.6
Bra002209.1-P Field mustard cytosol, peroxisome, plastid, vacuole 81.09 71.79
KRH51031 Soybean cytosol 51.28 61.43
KRH11382 Soybean cytosol 51.28 61.18
KRH20903 Soybean cytosol 51.11 59.64
KRH02117 Soybean cytosol 50.26 59.12
VIT_05s0020g02690.t01 Wine grape cytosol 46.85 56.01
Solyc01g080070.2.1 Tomato cytosol 36.97 51.06
PGSC0003DMT400083194 Potato cytosol 46.0 47.79
GSMUA_Achr3P09060_001 Banana cytosol, mitochondrion, nucleus 31.86 46.29
GSMUA_Achr8P00190_001 Banana cytosol 20.61 45.83
GSMUA_Achr10P... Banana cytosol 32.2 45.11
GSMUA_Achr8P00380_001 Banana cytosol 31.01 44.39
Os11t0147500-01 Rice cytosol 37.14 42.33
GSMUA_Achr11P... Banana cytosol, extracellular 17.38 42.32
GSMUA_Achr8P21830_001 Banana endoplasmic reticulum 30.15 42.04
Os12t0144600-01 Rice cytosol 37.31 41.79
GSMUA_Achr8P08580_001 Banana cytosol 27.26 41.67
Zm00001d017393_P001 Maize plastid 11.93 41.67
TraesCS5D01G141600.1 Wheat cytosol 36.97 41.41
TraesCS5A01G133900.1 Wheat cytosol 36.63 41.27
TraesCS5B01G131600.1 Wheat cytosol 36.46 41.23
GSMUA_Achr11P... Banana cytosol 25.89 40.53
Zm00001d016149_P001 Maize cytosol 31.01 38.64
HORVU5Hr1G040920.2 Barley cytosol 31.18 38.61
AT3G05220.1 Thale cress cytosol 37.65 38.3
Zm00001d053438_P002 Maize cytosol 31.69 37.96
EES04840 Sorghum cytosol 31.52 37.83
EES15655 Sorghum cytosol 34.58 35.99
TraesCS4A01G184700.1 Wheat cytosol, mitochondrion, nucleus 34.07 35.4
Zm00001d023372_P001 Maize cytosol 33.05 35.21
TraesCS4B01G134000.1 Wheat cytosol, mitochondrion, nucleus 34.24 35.2
TraesCS4D01G128900.1 Wheat cytosol, mitochondrion, nucleus 34.41 34.24
Zm00001d004931_P001 Maize cytosol, nucleus, plasma membrane 30.32 33.27
HORVU4Hr1G025770.8 Barley endoplasmic reticulum 33.22 32.28
OQU79299 Sorghum cytosol 19.42 29.16
OQU82864 Sorghum cytosol 23.17 28.87
KXG27723 Sorghum nucleus 27.94 27.56
AT5G27690.1 Thale cress nucleus 15.84 26.42
AT1G56210.1 Thale cress nucleus 16.35 26.37
EES07966 Sorghum cytosol, nucleus, peroxisome 21.98 25.7
AT5G37860.1 Thale cress nucleus 10.9 24.43
AT1G23000.2 Thale cress cytosol 17.38 24.4
GSMUA_Achr11P... Banana endoplasmic reticulum 10.73 19.03
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1EntrezGene:832028EMBL:AC068809ProteinID:AED92650.1ProteinID:AED92651.1
ProteinID:AED92652.1ProteinID:ANM69822.1ProteinID:ANM69823.1ArrayExpress:AT5G19090EnsemblPlantsGene:AT5G19090RefSeq:AT5G19090
TAIR:AT5G19090RefSeq:AT5G19090-TAIR-GEnsemblPlants:AT5G19090.1TAIR:AT5G19090.1EMBL:BT002910UniProt:F4JZL7
GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006810GO:GO:0008150GO:GO:0009506GO:GO:0009987GO:GO:0019725GO:GO:0030001
GO:GO:0046872GO:GO:0046914GO:GO:0046916InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
RefSeq:NP_001154719.1RefSeq:NP_001331474.1RefSeq:NP_001331475.1RefSeq:NP_197410.1RefSeq:NP_850851.1PFAM:PF00403
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PFscan:PS50846PANTHER:PTHR22814PANTHER:PTHR22814:SF134SUPFAM:SSF55008UniParc:UPI00001624F2SEG:seg
Description
HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
Coordinates
chr5:+:6387341..6390179
Molecular Weight (calculated)
59625.6 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.910
Length
587 amino acids
Sequence
(BLAST)
001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGPGPAGGK
301: IEGKGMPFPV QMGGGGGGPG GKKGGPGGGG GNMGNQNQGG GGKNGGKGGG GHPLDGKMGG GGGGPNGNKG GGGVQMNGGP NGGKKGGGGG GGGGGGPMSG
401: GLPPGFRPMG GGGGGGGGPQ SMSMPMGGAM GGPMGSLPQM GGGPGPMSNN MQAVQGLPAM GPGGGGGGGP SAEAPPGYFQ GQVSGNGGGG QDSMPGNPYL
501: QQQQQQQQQQ YLAAVMNQQR SMGNERFQPM MYARPPPAVN YMPPQPQPHQ QHPYPYPYPY PPQYPPHNGD QYSDYFNDEN TSSCNIM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.