Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21409 | Canola | cytosol | 68.42 | 80.11 |
| Bra024557.1-P | Field mustard | cytosol | 68.18 | 79.83 |
| CDY04749 | Canola | cytosol | 67.22 | 78.93 |
| VIT_01s0011g04710.t01 | Wine grape | cytosol | 38.04 | 40.77 |
| KRG90987 | Soybean | nucleus | 39.23 | 40.29 |
| KRH35767 | Soybean | nucleus | 38.52 | 39.56 |
| PGSC0003DMT400078487 | Potato | cytosol | 34.69 | 35.02 |
| GSMUA_Achr3P01290_001 | Banana | cytosol | 30.62 | 34.5 |
| GSMUA_Achr1P23080_001 | Banana | cytosol | 25.12 | 32.71 |
| GSMUA_Achr2P22760_001 | Banana | cytosol | 27.03 | 32.19 |
| GSMUA_Achr7P12020_001 | Banana | cytosol | 26.08 | 31.14 |
| GSMUA_Achr9P19310_001 | Banana | cytosol | 28.95 | 31.11 |
| GSMUA_Achr8P31620_001 | Banana | cytosol | 27.99 | 30.87 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 30.62 | 30.77 |
| TraesCS3B01G034100.1 | Wheat | cytosol | 30.86 | 30.71 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 30.14 | 30.51 |
| GSMUA_Achr10P... | Banana | cytosol | 25.36 | 30.46 |
| Os01t0125600-01 | Rice | cytosol | 29.43 | 29.29 |
| EES02570 | Sorghum | cytosol | 28.23 | 26.4 |
| Zm00001d040040_P001 | Maize | cytosol | 28.71 | 25.97 |
| Solyc05g008300.1.1 | Tomato | mitochondrion | 16.75 | 25.74 |
| Zm00001d008515_P001 | Maize | cytosol | 27.51 | 24.84 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 25.36 | 24.77 |
| AT3G06130.1 | Thale cress | cytosol | 23.45 | 20.72 |
| AT5G27690.1 | Thale cress | nucleus | 15.79 | 18.75 |
| AT1G56210.1 | Thale cress | nucleus | 16.03 | 18.41 |
| AT5G37860.1 | Thale cress | nucleus | 11.48 | 18.32 |
| AT5G19090.1 | Thale cress | cytosol | 24.4 | 17.38 |
| AT3G05220.1 | Thale cress | cytosol | 19.38 | 14.04 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:838908 | UniProt:A0A1P8AVS3 | ProteinID:ANM60743.1 | ArrayExpress:AT1G23000 |
| EnsemblPlantsGene:AT1G23000 | RefSeq:AT1G23000 | TAIR:AT1G23000 | RefSeq:AT1G23000-TAIR-G | EnsemblPlants:AT1G23000.2 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom |
| InterPro:HMA_dom_sf | InterPro:IPR006121 | RefSeq:NP_001323007.1 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF150 | SUPFAM:SSF55008 | UniParc:UPI00084857E3 | SEG:seg | : | : |
Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
Coordinates
chr1:+:8143312..8145156
Molecular Weight (calculated)
46006.3 Da
IEP (calculated)
9.538
GRAVY (calculated)
-0.830
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLECNLNS KIQNLMRKCG QVAVTFKCQS SLTHSTSFQI SEQKSLNPKP LHLIAYSSKA MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV
101: CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG
201: DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI
301: QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA
401: TNMSSEEDAG NNNSCNIM
101: CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG
201: DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI
301: QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA
401: TNMSSEEDAG NNNSCNIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.