Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21409 | Canola | cytosol | 96.63 | 96.36 |
| Bra024557.1-P | Field mustard | cytosol | 95.79 | 95.52 |
| AT1G23000.2 | Thale cress | cytosol | 78.93 | 67.22 |
| VIT_01s0011g04710.t01 | Wine grape | cytosol | 46.07 | 42.05 |
| KRG90987 | Soybean | nucleus | 46.35 | 40.54 |
| KRH35767 | Soybean | nucleus | 45.79 | 40.05 |
| CDY05148 | Canola | cytosol | 4.49 | 35.56 |
| PGSC0003DMT400078487 | Potato | cytosol | 41.29 | 35.51 |
| GSMUA_Achr3P01290_001 | Banana | cytosol | 35.11 | 33.69 |
| GSMUA_Achr1P23080_001 | Banana | cytosol | 29.78 | 33.02 |
| GSMUA_Achr8P31620_001 | Banana | cytosol | 34.55 | 32.45 |
| GSMUA_Achr7P12020_001 | Banana | cytosol | 31.46 | 32.0 |
| GSMUA_Achr2P22760_001 | Banana | cytosol | 31.18 | 31.62 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 36.52 | 31.25 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 36.24 | 31.23 |
| GSMUA_Achr9P19310_001 | Banana | cytosol | 33.99 | 31.11 |
| TraesCS3B01G034100.1 | Wheat | cytosol | 36.52 | 30.95 |
| GSMUA_Achr10P... | Banana | cytosol | 29.49 | 30.17 |
| Os01t0125600-01 | Rice | cytosol | 34.83 | 29.52 |
| EES02570 | Sorghum | cytosol | 34.55 | 27.52 |
| Zm00001d040040_P001 | Maize | cytosol | 34.83 | 26.84 |
| Zm00001d008515_P001 | Maize | cytosol | 34.55 | 26.57 |
| Solyc05g008300.1.1 | Tomato | mitochondrion | 19.94 | 26.1 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 29.21 | 24.3 |
| CDY71877 | Canola | cytosol | 26.4 | 21.81 |
| CDY58340 | Canola | cytosol | 27.53 | 21.35 |
| CDY01696 | Canola | cytosol | 14.33 | 21.25 |
| CDX74552 | Canola | cytosol | 14.04 | 21.19 |
| CDY24716 | Canola | cytosol | 16.29 | 20.57 |
| CDY53573 | Canola | nucleus | 19.94 | 20.4 |
| CDY13960 | Canola | cytosol | 28.09 | 20.2 |
| CDY41724 | Canola | nucleus | 19.94 | 20.11 |
| CDY47193 | Canola | cytosol | 26.4 | 19.79 |
| CDX92558 | Canola | cytosol | 28.93 | 18.46 |
| CDY25027 | Canola | cytosol | 18.54 | 18.28 |
| CDY05566 | Canola | nucleus | 18.26 | 18.21 |
| CDY40701 | Canola | cytosol | 21.07 | 17.32 |
| CDY66563 | Canola | cytosol | 20.79 | 17.17 |
| CDY27785 | Canola | cytosol | 23.6 | 15.08 |
| CDY71358 | Canola | nucleus | 9.55 | 14.23 |
| CDY18766 | Canola | cytosol | 22.47 | 14.21 |
| CDY05234 | Canola | nucleus | 9.83 | 14.06 |
| CDY18788 | Canola | cytosol | 20.51 | 13.83 |
| CDY05147 | Canola | cytosol | 17.42 | 12.65 |
Protein Annotations
| EnsemblPlants:CDY04749 | EnsemblPlantsGene:GSBRNA2T00119418001 | Gene3D:3.30.70.100 | GO:A0A078EVW7 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF150 | PFAM:PF00403 | PFscan:PS50846 | ProteinID:CDY04749 |
| ProteinID:CDY04749.1 | SEG:seg | SUPFAM:SSF55008 | UniParc:UPI0004EDC74D | MapMan:35.1 | : |
Description
BnaC05g18400D
Coordinates
chrLK031957:-:419018..420483
Molecular Weight (calculated)
39051.8 Da
IEP (calculated)
9.285
GRAVY (calculated)
-0.996
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKDEDFKLL KIQTYSLKVS IHCEGCNKKV KKLLQRIEGV YHVKVEAEHH KVTVSGSVDS ATLINKLLKA GKHAELWSPN PTTNPNQPQK PKASDVIKNN
101: QKGQKQGSAK SGLETFKPKN NPKGAACVKE EEDDDGGEEE DGEVQLPKPV NQQQQNVKKN SGGGGPMNNG NNGVNVSKKV NQKQNSQNQN NSQAMAAAMR
201: MRNAAKVNSG VENNEIGALM GLAGFNGAAS NAAVNPQNGI QQLQAPPLNN INSVANHNMN NGNGGGMMMN MNGYNPMNMQ NRPLMHHHQP QQMMYQRPAF
301: VPPPSNGYYY NYTPSPYTYY PYYPYPSDQH QQISHPSATN MPSDEDTSNN SSCNIM
101: QKGQKQGSAK SGLETFKPKN NPKGAACVKE EEDDDGGEEE DGEVQLPKPV NQQQQNVKKN SGGGGPMNNG NNGVNVSKKV NQKQNSQNQN NSQAMAAAMR
201: MRNAAKVNSG VENNEIGALM GLAGFNGAAS NAAVNPQNGI QQLQAPPLNN INSVANHNMN NGNGGGMMMN MNGYNPMNMQ NRPLMHHHQP QQMMYQRPAF
301: VPPPSNGYYY NYTPSPYTYY PYYPYPSDQH QQISHPSATN MPSDEDTSNN SSCNIM
001: MLLLECNLNS KIQNLMRKCG QVAVTFKCQS SLTHSTSFQI SEQKSLNPKP LHLIAYSSKA MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV
101: CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG
201: DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI
301: QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA
401: TNMSSEEDAG NNNSCNIM
101: CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG
201: DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI
301: QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA
401: TNMSSEEDAG NNNSCNIM
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.