Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74552 | Canola | cytosol | 94.58 | 96.19 |
| Bra028156.1-P | Field mustard | cytosol | 95.42 | 95.02 |
| AT5G37860.1 | Thale cress | nucleus | 78.75 | 72.14 |
| VIT_14s0006g01780.t01 | Wine grape | extracellular | 22.08 | 26.9 |
| Solyc02g091310.1.1 | Tomato | cytosol | 25.0 | 16.85 |
| CDY53573 | Canola | nucleus | 24.17 | 16.67 |
| CDY41724 | Canola | nucleus | 24.17 | 16.43 |
| PGSC0003DMT400078636 | Potato | cytosol | 24.17 | 16.29 |
| GSMUA_Achr7P12020_001 | Banana | cytosol | 23.33 | 16.0 |
| GSMUA_Achr1P23080_001 | Banana | cytosol | 20.83 | 15.58 |
| GSMUA_Achr2P22760_001 | Banana | cytosol | 22.5 | 15.38 |
| GSMUA_Achr3P01290_001 | Banana | cytosol | 23.75 | 15.36 |
| GSMUA_Achr10P... | Banana | cytosol | 22.08 | 15.23 |
| GSMUA_Achr8P31620_001 | Banana | cytosol | 23.75 | 15.04 |
| CDY24716 | Canola | cytosol | 17.08 | 14.54 |
| CDY04749 | Canola | cytosol | 21.25 | 14.33 |
| CDY21409 | Canola | cytosol | 21.25 | 14.29 |
| CDY05566 | Canola | nucleus | 21.25 | 14.29 |
| Os01t0125600-01 | Rice | cytosol | 25.0 | 14.29 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 24.58 | 14.29 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 24.58 | 14.18 |
| CDY25027 | Canola | cytosol | 21.25 | 14.13 |
| CDY71877 | Canola | cytosol | 25.0 | 13.92 |
| EES02570 | Sorghum | cytosol | 25.83 | 13.87 |
| TraesCS3B01G034100.1 | Wheat | cytosol | 24.17 | 13.81 |
| GSMUA_Achr9P19310_001 | Banana | cytosol | 22.08 | 13.62 |
| CDY40701 | Canola | cytosol | 24.17 | 13.39 |
| CDY66563 | Canola | cytosol | 23.75 | 13.23 |
| Zm00001d040040_P001 | Maize | cytosol | 25.42 | 13.2 |
| CDY58340 | Canola | cytosol | 25.0 | 13.07 |
| Zm00001d008515_P001 | Maize | cytosol | 24.17 | 12.53 |
| CDY47193 | Canola | cytosol | 24.58 | 12.42 |
| CDY13960 | Canola | cytosol | 24.58 | 11.92 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 20.0 | 11.21 |
| CDY18788 | Canola | cytosol | 24.17 | 10.98 |
| CDX92558 | Canola | cytosol | 25.42 | 10.93 |
| CDY05147 | Canola | cytosol | 21.67 | 10.61 |
| CDY18766 | Canola | cytosol | 24.58 | 10.48 |
| CDY27785 | Canola | cytosol | 24.17 | 10.41 |
| CDY05148 | Canola | cytosol | 1.67 | 8.89 |
| CDY05234 | Canola | nucleus | 7.08 | 6.83 |
| CDY71358 | Canola | nucleus | 5.42 | 5.44 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.2 | GO:A0A078EKL8 | EnsemblPlants:CDY01696 | ProteinID:CDY01696 | ProteinID:CDY01696.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00112783001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF134 | SUPFAM:SSF55008 | UniParc:UPI0004EEB987 | SEG:seg | : |
Description
BnaC04g30560D
Coordinates
chrLK031928:+:570227..571147
Molecular Weight (calculated)
28242.6 Da
IEP (calculated)
7.746
GRAVY (calculated)
-0.905
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSRMPRNV YEPLKTYFLK VNINCHGCNR KVKKTLRKVE GVYSVDIDTD QQAVIVRGNL DPEILVKKLN RRGKYAELLF KSPFHKDQFG NHHDNRSLRN
101: APYNFGNNHF NNVPSYERQS DGEMMKMMMA NNMKPVMMND ADYFQMNDSS EDFQELFGET AQRHNYDEEV HPNLMRDMEL GYSNAYPAAE TMNMHIPGRS
201: NNMMMNERSF HSQMMNGPSL VPQFMNQEQF SARQLNGFYY
101: APYNFGNNHF NNVPSYERQS DGEMMKMMMA NNMKPVMMND ADYFQMNDSS EDFQELFGET AQRHNYDEEV HPNLMRDMEL GYSNAYPAAE TMNMHIPGRS
201: NNMMMNERSF HSQMMNGPSL VPQFMNQEQF SARQLNGFYY
001: MPRNVYEPLK TYFLKVNINC QGCKMKVKKT LRKIEGVYSV DIDTDQEAVI VRGNLDPEIL VKKLNKRGKH AQLMFLTPYH KDQYFGNHQA VLNHDNRSLG
101: NTQYNFGSNH NNVPSYERLN HQSDEEMMMM MNMKPVMMND ADYFEMSDSP EDFQELFGEI PQRHNNYEDV KPNLMRDMDL GYSNAYPAAE TMNMQIGGRV
201: NNMMVNERGF HGQMMNERGF HGQMMNGPSL VPQSMNHEQF SSRPVQSMNQ QFSSRPVHGF YY
101: NTQYNFGSNH NNVPSYERLN HQSDEEMMMM MNMKPVMMND ADYFEMSDSP EDFQELFGEI PQRHNNYEDV KPNLMRDMDL GYSNAYPAAE TMNMQIGGRV
201: NNMMVNERGF HGQMMNERGF HGQMMNGPSL VPQSMNHEQF SSRPVQSMNQ QFSSRPVHGF YY
Arabidopsis Description
Copper-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q4PSD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.