Factsheet for TraesCS3D01G031400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G048000.1	Wheat	cytosol	95.16	94.47
TraesCS3B01G034100.1	Wheat	cytosol	95.64	94.05
HORVU3Hr1G004420.1	Barley	nucleus	83.29	80.37
Os01t0125600-01	Rice	cytosol	75.06	73.81
EES02570	Sorghum	cytosol	72.16	66.67
Zm00001d040040_P001	Maize	cytosol	71.91	64.29
Zm00001d008515_P001	Maize	cytosol	65.38	58.32
GSMUA_Achr3P01290_001	Banana	cytosol	42.13	46.9
GSMUA_Achr10P...	Banana	cytosol	39.47	46.84
GSMUA_Achr7P12020_001	Banana	cytosol	39.23	46.29
GSMUA_Achr2P22760_001	Banana	cytosol	38.01	44.73
VIT_01s0011g04710.t01	Wine grape	cytosol	40.19	42.56
KRG90987	Soybean	nucleus	39.71	40.29
KRH35767	Soybean	nucleus	39.47	40.05
CDY04749	Canola	cytosol	31.23	36.24
CDY21409	Canola	cytosol	30.75	35.57
Bra024557.1-P	Field mustard	cytosol	30.51	35.29
PGSC0003DMT400078487	Potato	cytosol	34.38	34.3
VIT_14s0006g01780.t01	Wine grape	extracellular	15.5	32.49
AT1G23000.2	Thale cress	cytosol	30.51	30.14
CDY01696	Canola	cytosol	14.29	24.58
AT5G37860.1	Thale cress	nucleus	15.01	23.66
Solyc05g008300.1.1	Tomato	mitochondrion	15.5	23.53
TraesCS5D01G141600.1	Wheat	cytosol	29.3	23.09
TraesCS2D01G115700.1	Wheat	cytosol	19.13	22.97
Bra028156.1-P	Field mustard	cytosol	13.32	22.82
CDX74552	Canola	cytosol	12.83	22.46
TraesCS1D01G234000.1	Wheat	cytosol	16.46	22.01
PGSC0003DMT400078636	Potato	cytosol	18.89	21.91
Solyc02g091310.1.1	Tomato	cytosol	18.4	21.35
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	26.88	18.81
TraesCS3D01G444600.1	Wheat	cytosol	14.77	18.65
TraesCS5D01G039100.2	Wheat	plastid	17.19	18.64
TraesCS1D01G100200.1	Wheat	plastid, vacuole	16.95	17.11

Protein Annotations

EnsemblPlants:TraesCS3D01G031400.1	EnsemblPlantsGene:TraesCS3D01G031400	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:11574794..11577549

Molecular Weight (calculated)

43851.9 Da

IEP (calculated)

7.387

GRAVY (calculated)

-0.939

Length

413 amino acids

Sequence
(BLAST)

001: MTKDEDFKLV KIQTHVLRVN IHCDGCKHKV KKLLQRIEGV YSVAIDVDNH KVTVTGSVDS ETLIRKLTRG GKHAELWSHQ KGGHNNQGHK GGGGGGNQQK
101: QQQQHQQQQK QAANVSKDGG GKGGGGQKEQ GKLGGGVGSL MQGLKAFKSQ HSKHQLPELS SDDDDDDMYD DEDDEDDDEF DDEYEDDLRF LGDKMSQLGI
201: LRQRAEAAAA INAKNKNGGN AANVGGKKGA PAGNHHHQNN QNQKMNMGAA AGNAKMGNGA QKNAGGIGGL MGLNHGLGAG GAAPGIQGYT GGGGFSHPSS
301: YGAAGYGGLQ QQQQQNGNLM ASMQGYHNNP APAAAMMNNL RGNMMMHQPQ AQPQMMYHRS PQISPYTAYY NPYSYYYQQP GAGGGSSAYH PGGGTGDVET
401: MFSDENTKGC AIM

Best Arabidopsis Sequence Match ( AT1G23000.1 )
(BLAST)

001: MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.