Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G452100.1 | Wheat | cytosol | 97.55 | 95.51 |
| TraesCS3B01G489000.1 | Wheat | cytosol | 97.25 | 95.21 |
| HORVU3Hr1G097770.1 | Barley | cytosol | 87.46 | 85.63 |
| Os01t0933200-00 | Rice | cytosol | 63.0 | 61.31 |
| Zm00001d042225_P002 | Maize | endoplasmic reticulum, vacuole | 59.33 | 51.19 |
| KXG34066 | Sorghum | cytosol, plastid | 59.63 | 46.99 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 38.53 | 40.78 |
| TraesCS2D01G115700.1 | Wheat | cytosol | 33.95 | 32.27 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 23.55 | 32.22 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 28.13 | 30.16 |
| GSMUA_Achr11P... | Banana | cytosol | 28.75 | 29.1 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 24.46 | 27.3 |
| TraesCS5D01G039100.2 | Wheat | plastid | 31.8 | 27.3 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 28.44 | 26.57 |
| KRH37116 | Soybean | cytosol | 21.1 | 25.65 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 23.55 | 25.16 |
| PGSC0003DMT400063687 | Potato | cytosol | 26.91 | 23.66 |
| KRH50862 | Soybean | cytosol | 21.1 | 23.47 |
| Solyc01g099600.2.1 | Tomato | cytosol | 26.61 | 23.2 |
| KRH02248 | Soybean | cytosol | 20.8 | 23.05 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 29.36 | 22.97 |
| Bra027947.1-P | Field mustard | nucleus | 24.46 | 22.66 |
| CDY41724 | Canola | nucleus | 24.46 | 22.66 |
| CDY53573 | Canola | nucleus | 23.85 | 22.41 |
| KRH33893 | Soybean | cytosol | 25.69 | 22.34 |
| PGSC0003DMT400029504 | Potato | nucleus | 21.1 | 22.33 |
| Solyc01g066880.2.1 | Tomato | cytosol | 21.41 | 22.29 |
| AT5G27690.1 | Thale cress | nucleus | 22.63 | 21.02 |
| KRH68524 | Soybean | cytosol | 22.02 | 20.45 |
| CDY05566 | Canola | nucleus | 22.32 | 20.45 |
| Bra020580.1-P | Field mustard | nucleus | 22.32 | 20.33 |
| TraesCS1D01G100200.1 | Wheat | plastid, vacuole | 25.38 | 20.29 |
| AT1G56210.1 | Thale cress | nucleus | 22.32 | 20.05 |
| CDY25027 | Canola | cytosol | 22.02 | 19.94 |
| KRH12046 | Soybean | cytosol | 21.1 | 19.11 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 18.65 | 14.77 |
| TraesCS5D01G141600.1 | Wheat | cytosol | 23.55 | 14.69 |
| TraesCS4D01G128900.1 | Wheat | cytosol, mitochondrion, nucleus | 22.32 | 12.37 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G444600.1 | EnsemblPlantsGene:TraesCS3D01G444600 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:553740234..553741843
Molecular Weight (calculated)
36074.7 Da
IEP (calculated)
5.812
GRAVY (calculated)
-1.041
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEPVEFQV VVLRVSIHCE GCKKKVKKVL LHIDGVYRCD IDARRNRVAV TVSPKIDAGI LVARLRKSGK LAEPWPEEPK QQQEPPPPAE SQSQEAKNQA
101: DDASKPNEAA EPSTAQPPAP EPEKTAEETP PPAEESKGPD EAKAETGPQQ QPSEANGKAK QQQQHQEQHD HHDKPMNARV TMEFDDARSR GVYGYGGPHQ
201: YMPATRQPPV HVMSYNVARP MASSSYYAAA PTPAAMPTPM ARPGPSHGGY IDEYAPPNYY SRPAPSAYEP YYYPDPQPSP YQHQRSAAED YYYGAPPPPP
301: QRSAFSPPRE AYGDMFNDEN ANSCSVM
101: DDASKPNEAA EPSTAQPPAP EPEKTAEETP PPAEESKGPD EAKAETGPQQ QPSEANGKAK QQQQHQEQHD HHDKPMNARV TMEFDDARSR GVYGYGGPHQ
201: YMPATRQPPV HVMSYNVARP MASSSYYAAA PTPAAMPTPM ARPGPSHGGY IDEYAPPNYY SRPAPSAYEP YYYPDPQPSP YQHQRSAAED YYYGAPPPPP
301: QRSAFSPPRE AYGDMFNDEN ANSCSVM
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Arabidopsis Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.