Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- endoplasmic reticulum 1
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G030300.1 | Wheat | cytosol | 82.68 | 91.3 |
| TraesCS5A01G030900.2 | Wheat | cytosol | 79.27 | 89.61 |
| HORVU4Hr1G046610.1 | Barley | cytosol, mitochondrion, nucleus | 76.12 | 78.17 |
| TraesCS7B01G462300.1 | Wheat | cytosol | 46.72 | 73.55 |
| Zm00001d047492_P001 | Maize | cytosol | 52.49 | 57.64 |
| HORVU7Hr1G118340.7 | Barley | cytosol, endoplasmic reticulum, plastid | 61.68 | 56.9 |
| Os03t0345700-01 | Rice | cytosol, nucleus | 33.86 | 51.6 |
| KXG39397 | Sorghum | cytosol | 53.02 | 47.42 |
| Zm00001d029126_P001 | Maize | nucleus | 51.18 | 42.21 |
| TraesCS2D01G115700.1 | Wheat | cytosol | 36.75 | 40.7 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 23.62 | 37.66 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 27.82 | 34.75 |
| GSMUA_Achr11P... | Banana | cytosol | 28.35 | 33.44 |
| TraesCS3D01G444600.1 | Wheat | cytosol | 27.3 | 31.8 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 25.2 | 31.07 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 27.56 | 30.0 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 23.36 | 29.09 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 22.31 | 29.01 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 30.18 | 27.51 |
| PGSC0003DMT400063687 | Potato | cytosol | 26.51 | 27.15 |
| Solyc01g099600.2.1 | Tomato | cytosol | 25.98 | 26.4 |
| KRH37116 | Soybean | cytosol | 18.37 | 26.02 |
| KRH33893 | Soybean | cytosol | 24.93 | 25.27 |
| Solyc01g066880.2.1 | Tomato | cytosol | 20.73 | 25.16 |
| PGSC0003DMT400029504 | Potato | nucleus | 20.21 | 24.92 |
| KRH02248 | Soybean | cytosol | 19.16 | 24.75 |
| CDY41724 | Canola | nucleus | 22.83 | 24.65 |
| Bra027947.1-P | Field mustard | nucleus | 22.83 | 24.65 |
| CDY53573 | Canola | nucleus | 22.31 | 24.43 |
| KRH68524 | Soybean | cytosol | 22.31 | 24.15 |
| KRH50862 | Soybean | cytosol | 18.37 | 23.81 |
| AT1G56210.1 | Thale cress | nucleus | 22.31 | 23.35 |
| TraesCS1D01G100200.1 | Wheat | plastid, vacuole | 23.62 | 22.0 |
| CDY05566 | Canola | nucleus | 19.16 | 20.45 |
| Bra020580.1-P | Field mustard | nucleus | 19.16 | 20.33 |
| CDY25027 | Canola | cytosol | 19.16 | 20.22 |
| AT5G27690.1 | Thale cress | nucleus | 18.11 | 19.6 |
| KRH12046 | Soybean | cytosol | 17.59 | 18.56 |
| TraesCS5D01G141600.1 | Wheat | cytosol | 23.88 | 17.37 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 18.64 | 17.19 |
| TraesCS4D01G128900.1 | Wheat | cytosol, mitochondrion, nucleus | 22.57 | 14.58 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G039100.2 | EnsemblPlantsGene:TraesCS5D01G039100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF124 | SEG:seg | SUPFAM:SSF55008 | TIGR:cd00371 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5D:+:40182935..40184169
Molecular Weight (calculated)
41510.2 Da
IEP (calculated)
6.328
GRAVY (calculated)
-0.919
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGEAAMQT FVLRVTIHCH GCKKKVRKVL KSIEGTSATL LLLLAPLHFR VAFGLIDYLT KWSSFWLGCS GVQDVKVDAQ LHKVMVTGTV DAETLIKRLH
101: KSGKQALPWQ HTPAKNPDPA PPTPADAPAP AEDGSKDAAV ADKKPAEEPQ ADSSDKRPEQ ETASEKKKPE TEKEAESEKK AGKEEEAKPR SSDEEKKDGG
201: EGAAAEPKAE GTEPASEPAA AAKEAGDDEG EAKKKQSKPK DADRSLSPAP APAHVPRYAH QEFNAPQPVM SYNMAQPRAS VSHYAPQPER GYSQQQAGYS
301: SYSMMQHPPA PAQQAYSQQA QPMQQWSPSY LYMPYPHASP ESYYQDYYSP PGTHASPPPP PPLHDSYRLF DDENPNSCSV M
101: KSGKQALPWQ HTPAKNPDPA PPTPADAPAP AEDGSKDAAV ADKKPAEEPQ ADSSDKRPEQ ETASEKKKPE TEKEAESEKK AGKEEEAKPR SSDEEKKDGG
201: EGAAAEPKAE GTEPASEPAA AAKEAGDDEG EAKKKQSKPK DADRSLSPAP APAHVPRYAH QEFNAPQPVM SYNMAQPRAS VSHYAPQPER GYSQQQAGYS
301: SYSMMQHPPA PAQQAYSQQA QPMQQWSPSY LYMPYPHASP ESYYQDYYSP PGTHASPPPP PPLHDSYRLF DDENPNSCSV M
001: MATDEMKSET KKTEHKQKQS TQIKQDLPPP TIPPLPLPYK SCTLKVSIHC EGCKRKVKKI LTSIEGVFKV DIDVKQHKVT VIGIISPEIL LKKLNKAGKN
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM
Arabidopsis Description
HIPP35Heavy metal-associated isoprenylated plant protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7J6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.