Factsheet for VIT_14s0060g02090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g00050.t01	Wine grape	cytosol	32.86	42.91
GSMUA_Achr11P...	Banana	endoplasmic reticulum	28.0	41.0
VIT_05s0020g01450.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	32.57	37.25
PGSC0003DMT400063687	Potato	cytosol	38.0	35.75
GSMUA_Achr5P21400_001	Banana	cytosol	31.14	35.74
GSMUA_Achr11P...	Banana	cytosol	32.57	35.29
Solyc01g099600.2.1	Tomato	cytosol	37.71	35.2
GSMUA_Achr1P24670_001	Banana	cytosol	28.0	33.45
Os07t0671400-01	Rice	cytosol	27.43	32.43
TraesCS2D01G115700.1	Wheat	cytosol	31.71	32.27
TraesCS2B01G134100.1	Wheat	cytosol	31.43	32.16
KRH33893	Soybean	cytosol	34.29	31.91
OQU90456	Sorghum	cytosol	31.71	31.9
TraesCS2A01G114900.1	Wheat	cytosol	31.14	31.87
TraesCS7B01G462300.1	Wheat	cytosol	22.0	31.82
KRH68524	Soybean	cytosol	31.71	31.53
Zm00001d022474_P001	Maize	cytosol	29.43	31.31
TraesCS1B01G245900.1	Wheat	cytosol	27.43	31.27
Zm00001d007130_P001	Maize	cytosol	28.29	31.13
TraesCS1A01G232800.1	Wheat	cytosol	26.86	30.82
CDY41724	Canola	nucleus	30.86	30.59
CDY53573	Canola	nucleus	30.29	30.46
TraesCS1D01G234000.1	Wheat	cytosol	26.86	30.42
Bra027947.1-P	Field mustard	nucleus	30.57	30.31
AT1G56210.1	Thale cress	nucleus	31.14	29.95
TraesCS5B01G030300.1	Wheat	cytosol	28.86	29.28
Bra020580.1-P	Field mustard	nucleus	29.43	28.69
CDY05566	Canola	nucleus	29.14	28.57
TraesCS5A01G030900.2	Wheat	cytosol	27.43	28.49
TraesCS3B01G489000.1	Wheat	cytosol	27.14	28.44
TraesCS3D01G444600.1	Wheat	cytosol	26.57	28.44
HORVU4Hr1G046610.1	Barley	cytosol, mitochondrion, nucleus	30.0	28.3
Os01t0933200-00	Rice	cytosol	27.14	28.27
TraesCS3A01G452100.1	Wheat	cytosol	26.86	28.14
AT5G27690.1	Thale cress	nucleus	28.29	28.12
CDY25027	Canola	cytosol	28.86	27.98
Os05t0368600-01	Rice	cytosol	27.14	27.94
Zm00001d047492_P001	Maize	cytosol	27.43	27.67
TraesCS5D01G039100.2	Wheat	plastid	30.0	27.56
VIT_14s0006g01780.t01	Wine grape	extracellular	15.43	27.41
GSMUA_Achr8P10080_001	Banana	endoplasmic reticulum	32.0	26.79
HORVU3Hr1G097770.1	Barley	cytosol	25.43	26.65
Zm00001d042225_P002	Maize	endoplasmic reticulum, vacuole	28.0	25.86
KXG39397	Sorghum	cytosol	29.71	24.41
HORVU1Hr1G058350.3	Barley	cytosol	21.71	24.36
HORVU7Hr1G118340.7	Barley	cytosol, endoplasmic reticulum, plastid	28.57	24.21
KXG34066	Sorghum	cytosol, plastid	28.0	23.61
Os03t0345700-01	Rice	cytosol, nucleus	16.86	23.6
VIT_01s0011g04710.t01	Wine grape	cytosol	24.29	21.79
Zm00001d029126_P001	Maize	nucleus	27.43	20.78
VIT_05s0020g02690.t01	Wine grape	cytosol	27.43	19.55
VIT_14s0128g00190.t01	Wine grape	cytosol	27.43	18.9
HORVU2Hr1G019950.2	Barley	plastid	16.29	12.26

Protein Annotations

EntrezGene:100247751	wikigene:100247751	Gene3D:3.30.70.100	MapMan:35.1	EMBL:AM431237	ProteinID:CAN73618
ProteinID:CAN73618.1	ProteinID:CCB61867	ProteinID:CCB61867.1	UniProt:F6I4N0	EMBL:FN596746	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	EntrezGene:LOC100247751	wikigene:LOC100247751
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF180	SUPFAM:SSF55008	UniParc:UPI00015C94D4
ArrayExpress:VIT_14s0060g02090	EnsemblPlantsGene:VIT_14s0060g02090	EnsemblPlants:VIT_14s0060g02090.t01	unigene:Vvi.18222	RefSeq:XP_002279364	RefSeq:XP_002279364.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:+:1674032..1676066

Molecular Weight (calculated)

37165.8 Da

IEP (calculated)

7.372

GRAVY (calculated)

-1.044

Length

350 amino acids

Sequence
(BLAST)

001: MATQGEAKEV VEEALEPLKY KTWVLKVSIH CEGCKKKVKK ILQNIDGVYT TEIDTRQQKV CVTGNVDVET LLKKLVKNGK HAELWPEKAD HQKEKKSKNK
101: EKQKDQESNE QEGGHDGDKE KSTVKFEAVQ EPTKNPEPKH SEAAAASGSG GGGGGGGGAK VGENGAAVKN GAAAQKEAKP EVKKPEASPA GEAPPAAEKK
201: VGESDACADK GGSGNGSKKK KKKGQKPNSD VGAPSSDTPA APPGSPNPSP APSHGPAPAS TQTVYHYPPH YYAPPQPAYT VSYNTMHPST SHEASYYATP
301: PPQYSYAYMH PGPWTEPPPS DFDSNPSSVH PPSDSFQFFS DENPNACSLM

Best Arabidopsis Sequence Match ( AT1G56210.1 )
(BLAST)

001: MATDEMKSET KKTEHKQKQS TQIKQDLPPP TIPPLPLPYK SCTLKVSIHC EGCKRKVKKI LTSIEGVFKV DIDVKQHKVT VIGIISPEIL LKKLNKAGKN
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM

Arabidopsis Description

HIPP35Heavy metal-associated isoprenylated plant protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7J6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.