Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G232800.1 | Wheat | cytosol | 90.88 | 91.48 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 91.53 | 90.94 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 65.15 | 64.1 |
| Os05t0368600-01 | Rice | cytosol | 57.33 | 51.76 |
| TraesCS3B01G489000.1 | Wheat | cytosol | 43.0 | 39.52 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 29.64 | 29.84 |
| TraesCS7B01G462300.1 | Wheat | cytosol | 23.45 | 29.75 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 23.13 | 29.71 |
| TraesCS2B01G134100.1 | Wheat | cytosol | 32.9 | 29.53 |
| KRH37116 | Soybean | cytosol | 24.76 | 28.25 |
| GSMUA_Achr11P... | Banana | cytosol | 28.99 | 27.55 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 31.27 | 27.43 |
| TraesCS5B01G030300.1 | Wheat | cytosol | 30.62 | 27.25 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 25.73 | 26.96 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 26.71 | 26.8 |
| PGSC0003DMT400063687 | Potato | cytosol | 31.6 | 26.08 |
| Solyc01g099600.2.1 | Tomato | cytosol | 31.6 | 25.87 |
| Solyc01g066880.2.1 | Tomato | cytosol | 25.08 | 24.52 |
| PGSC0003DMT400029504 | Potato | nucleus | 24.43 | 24.27 |
| CDY41724 | Canola | nucleus | 27.69 | 24.08 |
| CDY53573 | Canola | nucleus | 27.04 | 23.85 |
| Bra027947.1-P | Field mustard | nucleus | 27.36 | 23.8 |
| KRH68524 | Soybean | cytosol | 27.04 | 23.58 |
| KRH33893 | Soybean | cytosol | 28.66 | 23.4 |
| KRH02248 | Soybean | cytosol | 22.15 | 23.05 |
| KRH50862 | Soybean | cytosol | 21.82 | 22.79 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 29.97 | 22.01 |
| AT1G56210.1 | Thale cress | nucleus | 26.06 | 21.98 |
| AT5G27690.1 | Thale cress | nucleus | 24.43 | 21.31 |
| TraesCS1B01G119400.1 | Wheat | cytosol, plastid | 28.01 | 21.23 |
| KRH12046 | Soybean | cytosol | 24.43 | 20.78 |
| Bra020580.1-P | Field mustard | nucleus | 24.1 | 20.61 |
| CDY05566 | Canola | nucleus | 23.78 | 20.45 |
| CDY25027 | Canola | cytosol | 23.78 | 20.22 |
| TraesCS3B01G034100.1 | Wheat | cytosol | 22.8 | 16.67 |
| TraesCS5B01G131600.1 | Wheat | cytosol | 26.71 | 15.8 |
| TraesCS4B01G134000.1 | Wheat | cytosol, mitochondrion, nucleus | 25.08 | 13.49 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G245900.1 | EnsemblPlantsGene:TraesCS1B01G245900 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:435161909..435163036
Molecular Weight (calculated)
32858.1 Da
IEP (calculated)
7.737
GRAVY (calculated)
-0.764
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEPLQCKT LVLRVSIHCE GCKKKVKKVL QGVDGVYRCD IDARSNKVTV AVTGNVSADA LLKRLRRSGK HAQQWPEQQQ QQLAVGTQRP GETKNDAIQP
101: DKPGGTGTAH KPASGDAATS AAEQSNSKAT PEEDPNKVAR ETVKPAQDDT ESTNTDADAD DAVSHRSKEP TAEQCNGTQR KRKQLRQEEK PVDAIATVAV
201: AAASDQGSHT CHSPPHLQQQ QQPPPVHVLS YTMVRPSASA AYYAAAPATA APGARSLPPQ ELPYTYPPCC HYSQPSPWAP QIGAASPARY SYADIFSDDN
301: ANSCSVM
101: DKPGGTGTAH KPASGDAATS AAEQSNSKAT PEEDPNKVAR ETVKPAQDDT ESTNTDADAD DAVSHRSKEP TAEQCNGTQR KRKQLRQEEK PVDAIATVAV
201: AAASDQGSHT CHSPPHLQQQ QQPPPVHVLS YTMVRPSASA AYYAAAPATA APGARSLPPQ ELPYTYPPCC HYSQPSPWAP QIGAASPARY SYADIFSDDN
301: ANSCSVM
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Arabidopsis Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.