Factsheet for TraesCS4B01G134000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	96.32	97.35
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	97.55	94.41
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	93.87	88.74
TraesCS5B01G131600.1	Wheat	cytosol	64.1	70.52
Zm00001d016149_P001	Maize	cytosol	56.04	67.94
EES04840	Sorghum	cytosol	56.74	66.26
Zm00001d053438_P002	Maize	cytosol	53.77	62.65
EES15655	Sorghum	cytosol	58.32	59.04
Zm00001d023372_P001	Maize	cytosol	56.22	58.26
Zm00001d017393_P001	Maize	plastid	16.11	54.76
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	48.16	51.4
CDY05148	Canola	cytosol	3.68	46.67
GSMUA_Achr11P...	Banana	cytosol	29.6	45.07
EES07966	Sorghum	cytosol, nucleus, peroxisome	39.05	44.42
GSMUA_Achr8P08580_001	Banana	cytosol	29.42	43.75
OQU82864	Sorghum	cytosol	35.73	43.31
GSMUA_Achr11P...	Banana	cytosol, extracellular	17.86	42.32
GSMUA_Achr8P00380_001	Banana	cytosol	30.3	42.2
KXG27723	Sorghum	nucleus	43.61	41.85
KRH11382	Soybean	cytosol	35.9	41.67
KRH20903	Soybean	cytosol	35.73	40.56
GSMUA_Achr8P00190_001	Banana	cytosol	18.04	39.02
AT3G06130.1	Thale cress	cytosol	32.22	38.9
KRH51031	Soybean	cytosol	32.92	38.37
KRH02117	Soybean	cytosol	33.45	38.28
Solyc01g098760.2.1	Tomato	cytosol	28.55	38.17
Solyc01g080070.2.1	Tomato	cytosol	28.37	38.12
VIT_05s0020g02690.t01	Wine grape	cytosol	32.75	38.09
GSMUA_Achr10P...	Banana	cytosol	27.85	37.95
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	26.8	37.87
CDY13960	Canola	cytosol	32.57	37.58
Bra020774.1-P	Field mustard	cytosol	31.0	36.65
PGSC0003DMT400073578	Potato	cytosol	27.85	36.47
VIT_14s0128g00190.t01	Wine grape	cytosol	31.17	35.04
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	25.57	34.68
AT5G19090.1	Thale cress	cytosol	35.2	34.24
CDY66563	Canola	cytosol	25.39	33.64
CDY40701	Canola	cytosol	25.04	33.03
CDY71877	Canola	cytosol	24.87	32.95
Bra040643.1-P	Field mustard	cytosol	32.05	32.91
CDY18788	Canola	cytosol	30.12	32.58
Bra023702.1-P	Field mustard	cytosol	34.15	32.45
PGSC0003DMT400083194	Potato	cytosol	32.05	32.39
CDY47193	Canola	cytosol	26.8	32.21
CDY18766	Canola	cytosol	31.7	32.15
KRG92825	Soybean	cytosol	29.6	31.89
CDY58340	Canola	cytosol	25.57	31.81
CDY27785	Canola	cytosol	30.82	31.6
KRG96856	Soybean	cytosol	25.22	31.58
AT3G05220.1	Thale cress	cytosol	31.87	31.54
CDX92558	Canola	cytosol	30.65	31.36
KRH33969	Soybean	cytosol	30.47	31.07
Bra039452.1-P	Field mustard	cytosol	32.92	31.02
Bra001184.1-P	Field mustard	cytosol	25.57	30.93
KRH68586	Soybean	cytosol	25.22	30.77
Bra001140.1-P	Field mustard	cytosol, mitochondrion	28.02	30.65
CDY05234	Canola	nucleus	13.31	30.52
CDY71358	Canola	nucleus	12.61	30.13
CDY05147	Canola	cytosol	25.39	29.59
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	33.63	28.96
CDY24716	Canola	cytosol	14.19	28.72
TraesCS3B01G034100.1	Wheat	cytosol	19.44	26.43
TraesCS2B01G134100.1	Wheat	cytosol	15.76	26.32
TraesCS1B01G245900.1	Wheat	cytosol	13.49	25.08
TraesCS7B01G462300.1	Wheat	cytosol	10.51	24.79
TraesCS5B01G030300.1	Wheat	cytosol	14.71	24.35
TraesCS1B01G119400.1	Wheat	cytosol, plastid	16.64	23.46
TraesCS3B01G489000.1	Wheat	cytosol	12.78	21.86
GSMUA_Achr11P...	Banana	endoplasmic reticulum	12.43	21.45

Protein Annotations

EnsemblPlants:TraesCS4B01G134000.1	EnsemblPlantsGene:TraesCS4B01G134000	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF175	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:173967171..173969145

Molecular Weight (calculated)

59484.2 Da

IEP (calculated)

8.938

GRAVY (calculated)

-0.890

Length

571 amino acids

Sequence
(BLAST)

001: MSKEDVLKIQ TCVLKVNIHC DGCQKKVKKI LSKIDGVYQS TIDPEEGKVM VSGLVDPDTI IKKLNKGGKP AVLWGSKPGG VANQFQKLHL DGNGGGGKGQ
101: QPKDAGGKGH PKDAGGKAHK GGGKDAKMAM PQPTPQQIQQ MQQQMQMKGA PTPQQLQQLQ QQMQMKGAPT PQQLQQLQQQ MQMKGAPTPQ QMQQLQQQMQ
201: MKGAPTPQQL QQLQQQMQMK GLKLPPQFMG AAAAKMPFPA GAPAKDPKSV KFNLPEDGWG DDGGSEFDDE FDEFDDDEDF DDEGFEDDYY DDPKMMMKQM
301: AMPPNAGGGD KKGAGNGGKK GGGGNEIPVQ IKGNGNNGGG KKDAGGKQQH QGGNGNGNGN GGGKNGGGGG QPNNVKGGGA PVQGKKGGGA GGPAPGMGGP
401: MGGGMPPQQQ AMFRPNMMGG AGFPGMGGPM GHPHAASGAQ AGRAMQGMPP AGLYQGAGGG MPSGAEMLQA AAAAGNPMAQ QQYMQLIQQQ QQQQQMAMLQ
501: QQQQQQQMMM VNGGHGGGAG GYPQMGYGPG YGRPPMGSYP MPTAYAMPPQ PPAGEPYNYF SDEDPNSCSV M

Best Arabidopsis Sequence Match ( AT3G05220.1 )
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM

Arabidopsis Description

HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.