CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71877	Canola	cytosol	90.2	96.06
Bra001184.1-P	Field mustard	cytosol	93.03	90.47
CDY05234	Canola	nucleus	37.25	68.67
CDY71358	Canola	nucleus	33.77	64.85
CDY13960	Canola	cytosol	59.04	54.75
CDY47193	Canola	cytosol	54.03	52.21
CDY05148	Canola	cytosol	5.01	51.11
KRH11382	Soybean	cytosol	52.72	49.19
KRH51031	Soybean	cytosol	52.51	49.18
KRH02117	Soybean	cytosol	51.63	47.49
CDX92558	Canola	cytosol	57.73	47.49
KRH20903	Soybean	cytosol	51.2	46.72
VIT_05s0020g02690.t01	Wine grape	cytosol	49.89	46.64
GSMUA_Achr8P00190_001	Banana	cytosol	24.62	42.8
Solyc01g080070.2.1	Tomato	cytosol	38.56	41.65
CDY24716	Canola	cytosol	24.84	40.43
GSMUA_Achr10P...	Banana	cytosol	35.08	38.42
PGSC0003DMT400083194	Potato	cytosol	46.19	37.52
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	32.68	37.13
GSMUA_Achr8P00380_001	Banana	cytosol	32.24	36.1
GSMUA_Achr11P...	Banana	cytosol, extracellular	18.74	35.68
GSMUA_Achr8P08580_001	Banana	cytosol	29.85	35.68
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	32.68	35.63
CDY66563	Canola	cytosol	32.03	34.11
CDY40701	Canola	cytosol	32.03	33.95
GSMUA_Achr11P...	Banana	cytosol	26.8	32.8
Zm00001d017393_P001	Maize	plastid	11.98	32.74
TraesCS5A01G133900.1	Wheat	cytosol	36.17	31.86
TraesCS5D01G141600.1	Wheat	cytosol	36.17	31.68
Os12t0144600-01	Rice	cytosol	35.95	31.49
TraesCS5B01G131600.1	Wheat	cytosol	35.51	31.41
Os11t0147500-01	Rice	cytosol	35.08	31.26
CDY27785	Canola	cytosol	37.91	31.24
CDY18788	Canola	cytosol	35.73	31.06
CDY18766	Canola	cytosol	37.69	30.73
CDY05147	Canola	cytosol	30.94	28.98
Zm00001d053438_P002	Maize	cytosol	30.28	28.37
HORVU5Hr1G040920.2	Barley	cytosol	29.19	28.27
Zm00001d016149_P001	Maize	cytosol	28.76	28.03
EES04840	Sorghum	cytosol	29.85	28.02
EES15655	Sorghum	cytosol	34.42	28.01
Zm00001d023372_P001	Maize	cytosol	33.33	27.77
CDY04749	Canola	cytosol	21.35	27.53
CDY21409	Canola	cytosol	20.91	26.89
OQU79299	Sorghum	cytosol	22.88	26.85
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	29.85	25.61
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	31.81	25.57
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	30.94	25.13
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	32.24	25.08
CDX74552	Canola	cytosol	12.85	25.0
CDY01696	Canola	cytosol	13.07	25.0
CDY25027	Canola	cytosol	19.39	24.65
CDY05566	Canola	nucleus	19.17	24.65
CDY53573	Canola	nucleus	18.3	24.14
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	31.37	23.84
CDY41724	Canola	nucleus	18.3	23.8
OQU82864	Sorghum	cytosol	24.4	23.78
EES07966	Sorghum	cytosol, nucleus, peroxisome	25.05	22.91
KXG27723	Sorghum	nucleus	28.98	22.35
GSMUA_Achr11P...	Banana	endoplasmic reticulum	13.73	19.03

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:A0A078J3M2	UniProt:A0A078J3M2	EnsemblPlants:CDY58340	ProteinID:CDY58340
ProteinID:CDY58340.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001
GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00023473001	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF55008	UniParc:UPI0004EF0ADB	SEG:seg

Description

BnaA03g57410DBnaA03g57410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3M2]

Coordinates

chrLK033659:-:33744..35483

Molecular Weight (calculated)

48994.7 Da

IEP (calculated)

7.178

GRAVY (calculated)

-0.947

Length

459 amino acids

Sequence
(BLAST)

001: MSKEEFMNIQ TCVLKVNIHC EGCKQKVKKI LQKIEGVFTT KIDADQGKVT VSVSGSVDPS VLIEKLAKSG KHAEVWGPPK GNNNPNQSHD SHLVNQLKGM
101: QIDNKKGSGG KNNNNEKCPK NVGSGGGGNN PHQIQKMKGF QDMKLPQQLK DLKGSVPENK NQKQPGAKFN VPEEEEDDYF SDDDDEFTDA GDEDSDDDEF
201: DNLPSPSNKM KPNMMMPNNQ QMMMNANLGG GPTKTGGKRV YGGGKGEPNG GRKGDSGGAG NQNQGGGKNG GQNANGGHPQ DGKNGGGPNA GKKVNGGGGG
301: IPAGFLPMGG GVPPNMSMPI GGAGPSNITM PIGGLMGMGG LMGNIPAVHG LPATGASGIP PGYFQRAGPD PIQMQHQQQQ QQKQQQYLAA VMNQQRAMEN
401: ERFQPMMYAR PPLAVNYMPP HIHLHQYPNP YDPYPYPPHG NDQYFHVSNE ENTSSCDIM

Best Arabidopsis Sequence Match ( AT3G06130.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKGNGGG GPMAGGVSGG FRPMGGGGPQ NMSMPMGGQM GMGGPMGNMP AVQGLPATGP GGAPQGYFQG AGIDPMQMQQ QQQQQQYLAA
401: VMNQQRAMGN ERFQPMMYAR PPPAVNYMPP NPHQYPNPHP YPYPYPYPYP PPYGNDQYSH AFSDENTSSC DIM

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.