CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66563	Canola	cytosol	96.3	96.75
CDY05148	Canola	cytosol	9.01	86.67
Bra001140.1-P	Field mustard	cytosol, mitochondrion	94.92	78.74
CDY18788	Canola	cytosol	81.76	67.05
CDY18766	Canola	cytosol	84.53	65.01
AT3G05220.1	Thale cress	cytosol	83.6	62.74
CDY27785	Canola	cytosol	80.37	62.48
CDY05147	Canola	cytosol	68.36	60.41
Solyc01g098760.2.1	Tomato	cytosol	45.96	46.6
PGSC0003DMT400073578	Potato	cytosol	43.88	43.58
GSMUA_Achr8P00190_001	Banana	cytosol	24.25	39.77
CDY05234	Canola	nucleus	20.32	35.34
CDY47193	Canola	cytosol	38.34	34.95
CDY71358	Canola	nucleus	18.71	33.89
GSMUA_Achr11P...	Banana	cytosol, extracellular	18.48	33.2
CDY71877	Canola	cytosol	33.03	33.18
Zm00001d017393_P001	Maize	plastid	12.7	32.74
CDY13960	Canola	cytosol	37.41	32.73
CDY58340	Canola	cytosol	33.95	32.03
GSMUA_Achr8P00380_001	Banana	cytosol	30.25	31.95
GSMUA_Achr10P...	Banana	cytosol	30.72	31.74
VIT_14s0128g00190.t01	Wine grape	cytosol	37.18	31.69
GSMUA_Achr8P08580_001	Banana	cytosol	27.25	30.73
GSMUA_Achr11P...	Banana	cytosol	25.64	29.6
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	27.25	29.21
TraesCS5D01G141600.1	Wheat	cytosol	35.33	29.2
TraesCS5B01G131600.1	Wheat	cytosol	34.87	29.09
Os12t0144600-01	Rice	cytosol	35.1	29.01
Os11t0147500-01	Rice	cytosol	34.41	28.93
TraesCS5A01G133900.1	Wheat	cytosol	34.41	28.6
CDX92558	Canola	cytosol	36.49	28.32
KRG92825	Soybean	cytosol	34.41	28.11
KRG96856	Soybean	cytosol	29.56	28.07
KRH33969	Soybean	cytosol	36.03	27.86
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	26.79	27.55
CDY24716	Canola	cytosol	17.78	27.3
KRH68586	Soybean	cytosol	29.33	27.14
EES15655	Sorghum	cytosol	35.1	26.95
Zm00001d053438_P002	Maize	cytosol	30.48	26.94
EES04840	Sorghum	cytosol	30.25	26.79
Zm00001d016149_P001	Maize	cytosol	29.1	26.75
HORVU5Hr1G040920.2	Barley	cytosol	29.1	26.58
Zm00001d023372_P001	Maize	cytosol	33.26	26.13
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	33.03	25.04
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	32.1	24.6
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	33.26	24.41
CDY01696	Canola	cytosol	13.39	24.17
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	29.79	24.11
OQU79299	Sorghum	cytosol	21.48	23.79
CDX74552	Canola	cytosol	12.93	23.73
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	32.56	23.34
CDY53573	Canola	nucleus	18.01	22.41
CDY41724	Canola	nucleus	18.01	22.1
CDY25027	Canola	cytosol	18.01	21.61
CDY04749	Canola	cytosol	17.32	21.07
CDY05566	Canola	nucleus	17.09	20.73
EES07966	Sorghum	cytosol, nucleus, peroxisome	23.79	20.52
CDY21409	Canola	cytosol	16.63	20.17
OQU82864	Sorghum	cytosol	21.25	19.53
KXG27723	Sorghum	nucleus	26.56	19.33
GSMUA_Achr11P...	Banana	endoplasmic reticulum	12.93	16.92

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:A0A078HSJ5	UniProt:A0A078HSJ5	EnsemblPlants:CDY40701	ProteinID:CDY40701
ProteinID:CDY40701.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001
GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00071590001	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF55008	UniParc:UPI0004EEEE91	SEG:seg

Description

BnaC03g34170DBnaC03g34170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSJ5]

Coordinates

chrLK032477:+:231705..233961

Molecular Weight (calculated)

43594.7 Da

IEP (calculated)

9.799

GRAVY (calculated)

-0.766

Length

433 amino acids

Sequence
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGKVT VTGNVDPAIL VKKLSKSGKH AEIIGGGGGG GKGGKETNGK ANGGGGGGQS
101: HGHGQPMQLT PQQIQQMMMM KAAQAGGDED DDEMGGHGHM PPNKMTMMPN KMPQMGGGGG AKGPNEIMMM MNGLKAGGGG GGGGGGGGGF EIPVKMKGMG
201: EGKMGKEEKE NKGGGGKTGK ADAKSGGGLL GFFKKGKSEK GGGKKGDGGG DKVKSSGGGG GGGGGGGEVH HYDDGPKKGG GKSKGGAHDI DELMKQIKAG
301: GGANKGNHNH SAKGMGGPMG QGGPMGMMGP MGHQGGGAFP AVQGLPMSGG GGYYPPPPQA MNQQQYMEMM MQQQAAAYGG YGGGHGGDMY HPMMYARPYP
401: AVNYAHPPPM PPPHSGPYTD MFSDENPAGC SIM

Best Arabidopsis Sequence Match ( AT3G05220.1 )
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM

Arabidopsis Description

HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.